Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g02557 ATGGGGATGGGTTCCAAAATGGAAGGACCGTCTACCCCAGCAATTCGACGTGACCCATACGAGGTATTGTCCGTGTCGAGAGACTCAACCGATCAAGAAATTAAAACGGCTTACAGAAAGCTTGCTCTTAAGTATCACCCTGACAAGAATGCCAGCAATCCTGAAGCTTCGGAGCTATTTAAAGAGGTTGCATATTCTTATAGTATCTTGTCTGACCCAGAAAAGAGAAGGCAGTATGACAGTGCTGGATTTGAGGCCCTTGATGCTGATAGCATGGACATGGAAATTGATTTATCTAATCTTGGGACTGTGAACACAATGTTTGCAGCTTTATTCAGGTGTGCATTTTATTGCATGACTATTTGTTTTCAAAATTATTTTGCTTTGTTTCTGATTCTATTTTGTTACAGCAAACTGGGTGTCCCTATCAAGACTACCATTTCAGCTAATGTTCTTGAAGAAGCTCTGAATGGAACAGTTACAGTCAGACCCCTTCCAATTGGATCATCAGTCAGTGGAAAGGTAGAGAAGCAATGTGCTCATTTCTTTGGTGTGACAATAAATGAGCACCAAGCTGAGTCAGGCATTGTAGTAAGAGTTACTTCAACTGCACAAAGCAAATTCAAGTTACTCTACTTTGAACAAGATGCGAATGGAGGCTATGGTTTAGCATTGCAGGAAGACAGTGAGAAGACTGGCAAGGTGACATCTGCAGGAATGTATTTCTTACATTTTCAAGTGTATAGAATGGATTCGACGGTGAATGCGTTAGCAATGGCCAAGGATCCTGAAGGGGCCTTCTTTAAAAGGTTGGAAGGTCTTCAGCCTTGTGAAGTCTCGGAACTAAAGCCTGGCACTCATATATTTGCTGTTTATGGAGATAACTTCTTTAAGACTGCTAGCTATACAATTGAGGCAGTATGTGCAAAATCATATGAAGATACCACCCAAAAACTGAAGGACATTGAAGCTCAAATTTTAAGAAAGAGGAATGAGCTACGCCAATTTGAAGCAGAATATAGAAAGGCATTGGCACGCTATCAGGAAGTGACAGACAGATACACAAAAGAAAAACAATCCGTAGACGAGCTTCTGAAACAAAGGGATGGTATCCATTCTTCCTTCACCATTGTGAAGTCAACCAATATTAGTGGAAGTGGTAGCAATTTAAGCAATGGAAGTTCTAGCAAAATTAATGGTGACGAGAGTCCAGGGGAAGATGGAGGGTCAGATGGCAAGGATAAATCAGGCAAAAAGAAATGGTTTAACTTGAATCTTAGGGGTTCTGATAAGAAGTTGATTTAA 1305 0.4069 MGMGSKMEGPSTPAIRRDPYEVLSVSRDSTDQEIKTAYRKLALKYHPDKNASNPEASELFKEVAYSYSILSDPEKRRQYDSAGFEALDADSMDMEIDLSNLGTVNTMFAALFRCAFYCMTICFQNYFALFLILFCYSKLGVPIKTTISANVLEEALNGTVTVRPLPIGSSVSGKVEKQCAHFFGVTINEHQAESGIVVRVTSTAQSKFKLLYFEQDANGGYGLALQEDSEKTGKVTSAGMYFLHFQVYRMDSTVNALAMAKDPEGAFFKRLEGLQPCEVSELKPGTHIFAVYGDNFFKTASYTIEAVCAKSYEDTTQKLKDIEAQILRKRNELRQFEAEYRKALARYQEVTDRYTKEKQSVDELLKQRDGIHSSFTIVKSTNISGSGSNLSNGSSSKINGDESPGEDGGSDGKDKSGKKKWFNLNLRGSDKKLI 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g02557 434 CDD DnaJ 18 72 IPR001623 -
Gma10g02557 434 MobiDBLite consensus disorder prediction 386 434 - -
Gma10g02557 434 Coils Coil 312 367 - -
Gma10g02557 434 MobiDBLite consensus disorder prediction 404 434 - -
Gma10g02557 434 Pfam DnaJ domain 18 80 IPR001623 -
Gma10g02557 434 PRINTS DnaJ domain signature 20 38 IPR001623 -
Gma10g02557 434 PRINTS DnaJ domain signature 38 53 IPR001623 -
Gma10g02557 434 PRINTS DnaJ domain signature 55 75 IPR001623 -
Gma10g02557 434 PRINTS DnaJ domain signature 75 94 IPR001623 -
Gma10g02557 434 MobiDBLite consensus disorder prediction 386 401 - -
Gma10g02557 434 PANTHER CHAPERONE PROTEIN DNAJ 15-LIKE 4 113 - -
Gma10g02557 434 PANTHER CHAPERONE PROTEIN DNAJ 15-LIKE 135 432 - -
Gma10g02557 434 ProSitePatterns Nt-dnaJ domain signature. 60 79 IPR018253 -
Gma10g02557 434 MobiDBLite consensus disorder prediction 1 31 - -
Gma10g02557 434 Gene3D DnaJ domain 5 100 IPR036869 -
Gma10g02557 434 SMART dnaj_3 17 75 IPR001623 -
Gma10g02557 434 PANTHER DNAJ DOMAIN (PROKARYOTIC HEAT SHOCK PROTEIN) 135 432 - -
Gma10g02557 434 PANTHER DNAJ DOMAIN (PROKARYOTIC HEAT SHOCK PROTEIN) 4 113 - -
Gma10g02557 434 ProSiteProfiles dnaJ domain profile. 18 83 IPR001623 -
Gma10g02557 434 SUPERFAMILY Chaperone J-domain 17 121 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g02557 Gma-Chr10 52934146 52939237 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g02557 11 90 C2H2 Transcription Factor Family AT1G74250 42.353 1.02e-12 68.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g02557 - - gmx:100811270 753.051
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g02557 10 52934146 52939237 Gma20g01139 20 38159733 38169848 GST