Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g02552 ATGTCAACGGTTTATGTGATCCTTTTGTTTTCTCATCTAACGGCGGTGCTTCTGTCAGCCGGGAATGCAAACGGGCACCATGATGAGTGTCCAGACTCATTTGATTGTGGAAGTTTGGGCAGAATTTACTTCCCCTTCACCACGGTACAATACCTGAACTGTGGTGCTTTGGCTATCCATGGTTGTGATGATCATAACCAAACAGCAGTGAAGCGTGTCCACTTGAACAATGGAGGGAAACTGTTCCAAGTTACACAAGTTAATAGTCATCAGAGGCAGTGGTGGAGACCTAGTATTTCCATTACCGATCATGATTTCAGAATGCTTCTGGTAAATGGTAGTTGTATGGCCTTCACCTACAACATTATCTTCCCTCCCTTCTCTGCTTTCGGTTATTTTGATATGAAAAACAATATAACCACCTTCAAATGCAGACACAATCAAACAGTCAACCATACAAATGACTTCATCAACTATACAGGATGTCCTTCCTCTGATTTTTACTTTGCCCCTCCATACTCTGATTATGAGTCCTTGCGCTCCTTAATCTCTTCATGTTCAATGGTTAAACTTCCCGTGAGACAAGATTCTCAGTTCTTCAAAGATCCATTTGGATTTTTAACTGCTGAAATTACCTTTGAATTCAAGTTTTCAAATGAATGTCTCCAGTGTTACCATGGAAGAAGAGATGGCAATTGCCGACTTGACAGCAAGGGAAATTTTTATTGCGCCAACAGGAGGGAACGTGTAACTGCTAGTGGAGGTGAAGTTGGGAGACTTAGCATTGTTGGTGGGGCTGAGATTGGTCCCCTTCGTTGCTGGCCAGGAGGTCTATGCCTTTCTAGGTCAATAGGTGACATGGATGTTGGGGAGTTCATAGTTCCAATACCATATGTCAAACAAGTAAAGCTGTCAAAAGCTGGTGGGAGGCTTGTAATTGCCTCTGATGGCATATGGGATGCTCTATCATCAGAAATGGCTGCAAAATCTTGCCGTGGTTTGCCTGCTGAACTTGCTGCTATGCAGGTTGTCAAGGAAGCACTAAGAACGAGAGGGTTAAAGGACGATACAACTTGCATAGTAGTTGACATTATCCCACCTGATAATGAATTGCCACCAACACCTCCCCCCCCAAAACGGAACAAGCTGAGAGATCTTCTTTCCTTCAGGAAGAGGTCCCGTGATTCTGCCAGTAAGCTGTCAAAAAAGCTTTCAGCTATAAATATAGTGGAGGAACTGTTTGAAGAAGGATCCGCAATGCTTGCTGAAAGATTAGGAAATGATGACAACTTGAACTCAGGGCAATCAACATCTGGCATTTTTGTCTGTGCTGTATGTCAAGTTGATCTTGCTCCAAGTGAGGGCATCTCTGTCCACGCAGGTTCCATTTTCTCCACCAGCTCCAAACCCTGGGAAGGTCCTTTTCTATGTTTTGATTGCCGTGATAAGAAGGATGCTATGGAAGGAAAACGTCCAAGTGGAGTTAAGGTGTCATAG 1497 0.4369 MSTVYVILLFSHLTAVLLSAGNANGHHDECPDSFDCGSLGRIYFPFTTVQYLNCGALAIHGCDDHNQTAVKRVHLNNGGKLFQVTQVNSHQRQWWRPSISITDHDFRMLLVNGSCMAFTYNIIFPPFSAFGYFDMKNNITTFKCRHNQTVNHTNDFINYTGCPSSDFYFAPPYSDYESLRSLISSCSMVKLPVRQDSQFFKDPFGFLTAEITFEFKFSNECLQCYHGRRDGNCRLDSKGNFYCANRRERVTASGGEVGRLSIVGGAEIGPLRCWPGGLCLSRSIGDMDVGEFIVPIPYVKQVKLSKAGGRLVIASDGIWDALSSEMAAKSCRGLPAELAAMQVVKEALRTRGLKDDTTCIVVDIIPPDNELPPTPPPPKRNKLRDLLSFRKRSRDSASKLSKKLSAINIVEELFEEGSAMLAERLGNDDNLNSGQSTSGIFVCAVCQVDLAPSEGISVHAGSIFSTSSKPWEGPFLCFDCRDKKDAMEGKRPSGVKVS 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g02552 498 CDD PP2Cc 229 364 IPR001932 -
Gma10g02552 498 Gene3D - 223 366 IPR036457 -
Gma10g02552 498 PANTHER PROTEIN PHOSPHATASE 2C 15-RELATED 245 497 - -
Gma10g02552 498 Pfam Protein phosphatase 2C 247 336 IPR001932 -
Gma10g02552 498 SMART PP2C_4 101 362 IPR001932 -
Gma10g02552 498 ProSiteProfiles PPM-type phosphatase domain profile. 1 364 IPR001932 -
Gma10g02552 498 SUPERFAMILY PP2C-like 235 364 IPR036457 -
Gma10g02552 498 PANTHER ALPHABET, ISOFORM E-RELATED 245 497 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g02552 Gma-Chr10 52861609 52886501 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g02552 127 497 PP2C-type Phosphatase Gene Family AT1G68410 60.052 3.16e-140 409
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g02552 - - gmx:100778085 525.398
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g02552 10 52861609 52886501 Gma20g01147 20 38313170 38317144 GST