Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g02551 ATGTGTGGAGTTTATGAATTTGTATCAttgcttttgttttgtcaccttatgccacttctattggcggcggcttgtccacctctgctttcttgtggagatcttggcaatatcagtttcccctttactacaacagaacgccccgactgtggctttttacccatacggaattgtgaagatccactcaagttcaaaatgatccaattaaagaataatggagaatggtttcgggttgtactcgtagctcagcttcggaacagttctatcataacttttcaaattagagacaaacatctctatgaccttctgcagaacgaaagttgtgaagctttcagatacaattatactattcctcccttctttcactttgctgctttacgtatccaataccacacaagtctgttcaggtgcaagcgcagcctccatgtcagccctcccacgggcatgcttaattatacaaaatgccccgactacgatctctactacaagcacatcatcacggctgatgatgtgtctcggagttctttggtggcatgtacagaggtccagcttccaattaaagacgtgcctgacgctataaacccatttacctttgtaactgcagatatcatcattcgagtagacttaactgatgaatgtgcagattgcaactatcgccatggagggcagtgcaaacttgacagcacagagaaattttgttgtgccaatgCAGTTATAAAGAAAGGGTTGAGTTTGAAGGCCAAACTGGGTATAGgtttaggtattggaatcccaagcatgttggcaattgggttgctgtttctctttctacaatacaaacgaaaatatggtacctcaggcggacaattgGAGTCAAGAGATTCTTATTCTGATTCCTCCTCAAATCCTCATGGAGAAAGTAGTAGCGAGTACTTTGGAGTTCCACTCTTCTTGTACGAGCAGCTTAAAGAAGCGACGAACAATTTCGATCACACCAAAGAACTTGGAGACGGAGGCTTCGGTACTGTCTACTATGGGAAACTCCCAGATGGACGTGAAGTTGCCGTGAAGCGCTTATACGAGCACAACTGGAAGCGAGTAGAACAGTTCATAAACGAAGTTAAGATCCTCACACGTTTGCGTCACAAAAATCTTGTGTCACTCTACGGCTGCACTTCACGGCACAGCCGTGAACTCCTACTTGTGTATGAATACATTTCAAACGGCACTGTAGCGTGTCATCTCCATGGTGGATTAGCGAAGCCTGGCTCCCTACcatggtctacacgaatgaaaattgccgtagagactgctagtgcattggcttatctccacgcctctgacatcattcaccgtgacgtgaaaacaaacaatattctcctcgacaacaacttttgtgttaaggtagcagattttggactttcaagagacgtccccaacgatgtcacacatgtctccacagctccacaagggtccccaggttaccttgaccctgaatattacaattgctatcagcttactagtaagagtgatgtgtatagttttggggttgtgcttattgagctAATATCATCCAAGCCCGCTGTTGATATGAACAGGAGCAGGGATGAGATTAACTTGTCAAATCTAGCCGTAAGGAAGATTCAAGAAAGTGCAGTTAGTGAGTTGGTTGATCCTTCTCTTGGTTTTGATTCAGATTGTAGGGTTATGGGGATGATAGTTTCAGTGGCAGGGTTGGCTTTTCAGTGTTTGCAAAGGGAAAAGGACTTGAGACCTTCTATGTATGAAGTGTTACATGAACTGAGGAGAATTGAGAGTGGGAAGGATGAGGGAAAGGTTCAAGATGAGGCTGATGTTGATGGTGTTGCAGTTTCACATAGTTGTGCACATTCACCACCACCAGCCTCACCTGAGTGGGAAGAAGTTGGATTGTTGAAGAATATAAAGCCTACTTCCCCAAACACTGTCACTGATAAATGGGAAAGTAAATGTACTACGCCTAATATCAGTGGTTAA 1992 0.2043 MCGVYEFVSLLLFCHLMPLLLAAACPPLLSCGDLGNISFPFTTTERPDCGFLPIRNCEDPLKFKMIQLKNNGEWFRVVLVAQLRNSSIITFQIRDKHLYDLLQNESCEAFRYNYTIPPFFHFAALRIQYHTSLFRCKRSLHVSPPTGMLNYTKCPDYDLYYKHIITADDVSRSSLVACTEVQLPIKDVPDAINPFTFVTADIIIRVDLTDECADCNYRHGGQCKLDSTEKFCCANAVIKKGLSLKAKLGIGLGIGIPSMLAIGLLFLFLQYKRKYGTSGGQLESRDSYSDSSSNPHGESSSEYFGVPLFLYEQLKEATNNFDHTKELGDGGFGTVYYGKLPDGREVAVKRLYEHNWKRVEQFINEVKILTRLRHKNLVSLYGCTSRHSRELLLVYEYISNGTVACHLHGGLAKPGSLPWSTRMKIAVETASALAYLHASDIIHRDVKTNNILLDNNFCVKVADFGLSRDVPNDVTHVSTAPQGSPGYLDPEYYNCYQLTSKSDVYSFGVVLIELISSKPAVDMNRSRDEINLSNLAVRKIQESAVSELVDPSLGFDSDCRVMGMIVSVAGLAFQCLQREKDLRPSMYEVLHELRRIESGKDEGKVQDEADVDGVAVSHSCAHSPPPASPEWEEVGLLKNIKPTSPNTVTDKWESKCTTPNISG 663
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g02551 663 Gene3D Transferase(Phosphotransferase) domain 1 398 620 - -
Gma10g02551 663 SUPERFAMILY Protein kinase-like (PK-like) 295 593 IPR011009 -
Gma10g02551 663 PANTHER WALL-ASSOCIATED KINASE-LIKE PROTEIN 20 662 - -
Gma10g02551 663 Pfam Protein tyrosine and serine/threonine kinase 324 548 IPR001245 GO:0004672|GO:0006468
Gma10g02551 663 MobiDBLite consensus disorder prediction 642 663 - -
Gma10g02551 663 ProSitePatterns Protein kinases ATP-binding region signature. 327 349 IPR017441 GO:0005524
Gma10g02551 663 ProSitePatterns Serine/Threonine protein kinases active-site signature. 441 453 IPR008271 GO:0004672|GO:0006468
Gma10g02551 663 Gene3D Phosphorylase Kinase; domain 1 293 397 - -
Gma10g02551 663 ProSiteProfiles Protein kinase domain profile. 321 594 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma10g02551 663 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 20 662 IPR044652 -
Gma10g02551 663 SMART serkin_6 321 596 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g02551 Gma-Chr10 52843428 52847065 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g02551 29 663 Receptor kinase-like Gene Family AT1G25390 46.885 7.05e-173 505
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Gma10g02551 PK_Tyr_Ser-Thr 1.2e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g02551 - - gmx:100305407 1197.57
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g02551 10 52843428 52847065 Gma20g01153 20 38362912 38366522 GST