Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g02545 ATGCTCCCTTTTTTTGCTTTGTTCTTTTTTCTTCTTTGCTGCAACTCTCTTGCACCCGTGGTGTATTCTCTGAATGCCGAAGGTTCTGTGCTTTTGACACTGAAGCAGACCCTCACAGACCCACAAGGGTCCATGAGTAACTGGAATTCCTTCGATGAAAACCCTTGTTCATGGAATGGGATCACTTGCAAGGACCAAACTGTTGTGTCCATTAGCATCCCTAAGAGGAAACTCTATGGCTCTCTTCCTTCTTCTCTGGGATCTCTCTCCCAGCTTCGCCATATCAACTTCAGGAACAACAAGCTCTTTGGAAACTTGCCTCCACGGCTCTTTCAGGCTCAGGGACTTCAAAGCTTGGTGCTTTATGGCAATTCGCTTTCTGGGTCTGTCCCAACTGAGATTCAGAACCTCAGGTACCTTCAAGCTCTAGACTTATCACAAAATTTCTTCAATGGGTCATTGCCTGCTGGAATTGTCCAATGCAAGAGACTCAAAACCCTTATTCTCAGTCAGAACAATTTCACTGGCCCTTTGCCAGATGGGTTTGGTACTGGTTTGTCTTCTCtggaaagactagacctttcttacaatcacttcaatgggtcaattcccagtgacttgGGAAATCTGTCAAGCCTGCAAGGAACTGTTGATTTGTCTAATAATTATTTTAGTGGTTCAATTCCAGCTAGCCTTGGTAATCTTCCTGAGAAGGTTTACATTGATCTTACGTACAACAATTTAAATGGTCCAATACCCCAAAATGGTGCTTTGATGAATAGAGGGCCAACTGCTTTCATTGGCAATCCTGGTCTCTGTGGTCCTCCTTTGAAGAATTCATGTGCTTCTGATACTTCATCTGCTAATTCACCTTCCTCATTTCCATTTATTCCTGATAACTACTCACCTCAGGGTACTGGTAATGGTTCCATGGGAAGTGAGAAAAACAAAGGGCTAAGTAAGGGAGCTGTGGTTGGCATTGTTGTGGGTGATATAATTGGAATTTGCCTTTTAGGTTTGCTGTTCTCTTTTTGCTACTCAAGGGTTTGTGGTTTTAACCAGGATCTGGATGAGAATGATGTTAGCAAGGGAAAGAAAGGGAGGAAAGAGTGCTTCTGCTTCAGAAAAGATGACTCTGAGGTCCTATCTGATAATAATGTTGAGCAATATGATCTTGTCCCATTAGATTCCCATGTGAACTTTGATTTGGATGAGCTTCTCAAGGCTTCAGCTTTTGTGCTGGGTAAGAGTGGAATAGGGATTATGTACAAAGTGGTGCTTGAAGATGGACTTGCTTTGGCTGTGAGAAGATTGGGAGAGGGAGGTTCTCAAAGGTTTAAAGAGTTCCAAACAGAGGTAGAAGCAATAGGGAAGTTAAGACATCCAAATATTGCAACTCTGAGAGCCTATTACTGGTCTGTTGATGAGAAGCTTCTCATATATGATTATGTACCCAATGGAAGCCTTGCTACAGCAATTCATGGGAAGGCTGGACTTGACACATTTGTGCCACTATCTTGGTCCTATAGATTGAAAATCATGAAAGGAACTGCGAAGGGATTGCTCTATCTTCATGAATTTAGTCCCAAAAAATATGTCCATGGAGACCTCAAGCCAAGTAACATACTTCTTGGACAAAACATGGAACCCCACATTTCTGACTTCGGAGTTGGGCGCCTTGCAAACATCGCTGGAGGGTCTCCAACCTTGCAATCGAACCGAGTGGCCGCTGAGAAACTACAGGGAAGACAAAAGAGCTTGTCCAATGAAGTCACAAGCAATGTGTTGGGAAACGGTTACATGGCACCAGAAGCAATGAAAGTGGTGAAGCCATCACAGAAGTGGGATGTGTATTCATATGGTGTGATATTGTTGGAAATTATCACAGGAAGATCATCCATTGTGCTAGTGGGGAACTCAGAAATGGACCTTGTTCAGTGGATTCAGTTGTGCATTGAGGAAAAGAAGCCACTCTTGGAGGTGTTAGACCCTTACTTGGGTGAAGATGCAGATAGAGAAGAGGAGATTATTGGAGTTTTGAAGATTGCAATGGCTTGTGTTCATAGCAGCCCTGAAAAGAGGCCTACTATGAGGCACGTGCTTGATGCTTTGGATAAATTGACTATTTCCTCTGATTGA 2139 0.4212 MLPFFALFFFLLCCNSLAPVVYSLNAEGSVLLTLKQTLTDPQGSMSNWNSFDENPCSWNGITCKDQTVVSISIPKRKLYGSLPSSLGSLSQLRHINFRNNKLFGNLPPRLFQAQGLQSLVLYGNSLSGSVPTEIQNLRYLQALDLSQNFFNGSLPAGIVQCKRLKTLILSQNNFTGPLPDGFGTGLSSLERLDLSYNHFNGSIPSDLGNLSSLQGTVDLSNNYFSGSIPASLGNLPEKVYIDLTYNNLNGPIPQNGALMNRGPTAFIGNPGLCGPPLKNSCASDTSSANSPSSFPFIPDNYSPQGTGNGSMGSEKNKGLSKGAVVGIVVGDIIGICLLGLLFSFCYSRVCGFNQDLDENDVSKGKKGRKECFCFRKDDSEVLSDNNVEQYDLVPLDSHVNFDLDELLKASAFVLGKSGIGIMYKVVLEDGLALAVRRLGEGGSQRFKEFQTEVEAIGKLRHPNIATLRAYYWSVDEKLLIYDYVPNGSLATAIHGKAGLDTFVPLSWSYRLKIMKGTAKGLLYLHEFSPKKYVHGDLKPSNILLGQNMEPHISDFGVGRLANIAGGSPTLQSNRVAAEKLQGRQKSLSNEVTSNVLGNGYMAPEAMKVVKPSQKWDVYSYGVILLEIITGRSSIVLVGNSEMDLVQWIQLCIEEKKPLLEVLDPYLGEDADREEEIIGVLKIAMACVHSSPEKRPTMRHVLDALDKLTISSD 712
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g02545 712 SMART LRR_typ_2 186 210 IPR003591 -
Gma10g02545 712 SMART LRR_typ_2 89 113 IPR003591 -
Gma10g02545 712 SMART LRR_typ_2 137 161 IPR003591 -
Gma10g02545 712 Gene3D Phosphorylase Kinase; domain 1 378 483 - -
Gma10g02545 712 SUPERFAMILY Protein kinase-like (PK-like) 413 704 IPR011009 -
Gma10g02545 712 ProSitePatterns Serine/Threonine protein kinases active-site signature. 532 544 IPR008271 GO:0004672|GO:0006468
Gma10g02545 712 Pfam Protein kinase domain 414 702 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma10g02545 712 SMART serkin_6 413 708 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma10g02545 712 Pfam Leucine rich repeat 163 214 IPR001611 GO:0005515
Gma10g02545 712 Pfam Leucine rich repeat 91 148 IPR001611 GO:0005515
Gma10g02545 712 Gene3D Ribonuclease Inhibitor 18 76 IPR032675 -
Gma10g02545 712 Gene3D Ribonuclease Inhibitor 77 284 IPR032675 -
Gma10g02545 712 CDD STKc_IRAK 414 707 - -
Gma10g02545 712 ProSiteProfiles Protein kinase domain profile. 408 707 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma10g02545 712 Pfam Leucine rich repeat N-terminal domain 25 63 IPR013210 -
Gma10g02545 712 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 6 711 - -
Gma10g02545 712 PANTHER RECEPTOR PROTEIN KINASE-LIKE PROTEIN ZAR1 6 711 - -
Gma10g02545 712 Gene3D Transferase(Phosphotransferase) domain 1 484 711 - -
Gma10g02545 712 SUPERFAMILY L domain-like 26 277 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g02545 Gma-Chr10 52774752 52777000 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g02545 1 712 Receptor kinase-like Gene Family AT2G01210 65.651 0.0 954
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Gma10g02545 Pkinase 2.2e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g02545 - - gmx:100807517 1368.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g02545 10 52774752 52777000 Gma20g01162 20 38451903 38454473 GST