Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g02541 ATGGAGGCGCAACCGCCAACCCCCTCGACTGCGCCGCCGCCTCTGCCGCCACACCTCAGCTACCCCGACTCCGTGGAATCCTCGCCTCGCTCCCGCAACACCGACTCCTGGGACGAGCCCTTCGCGCCGGCGTCCACCAAGCTCCGTCTCATGTGCAGCTACGGCGGGCACATCGTCCCCCGCCCCCACGACAAGTCCCTCTGCTACGTGGGTGGCGACACGCGCATCATCGTGTCCGAACGCGCCACCTCACTCGCAGACCTCTCCATGCGCCTCTCGAAAACTTTCCTGAACGGAAGACCCTTCACGCTCAAGTACCAGCTCCCCAACGAGGACCTCGATTCCCTCATCTCCGTCACCACCGACGAGGACCTCGAGAACATGATCGACGAGTACGACCGCACCGCCGCCTCCGCCACCTCCGCCGTCAAACCCTCCCGAATCCGCCTCTTCCTCTTTCCCACCAAACCCGAATCCACTCACTCTATCCCTCCCCAAATTCTTGACACGTCAGCCAAATCGGACGATTGGTTTTTGAATGCGTTAAACGGCGCCGGATTGCTTAACCGCGGGTTTTCTGACTCTGCTTCTGTGAATTGCCTTCTTGGACTTGACGACGAGGTTGCCGGGAATAATCTCGAACCCGGTTCGAAGGACggtggggatggtggtggtggtggtggggttggtggcggtggtgCTTCGCAGGGTGGATCTTTCGGGAACGGGAAGAATTTGAAGCAGGATGTTCACTCCATTCCCGATTCGCCCATGCTCGAAACGACGTCGTCGTTTGGGTCCACTTCTTCGTCGCCTTCGCTTGCGAACTTGCCGCCGATTAGGGTTCATGTTGTGGAGGATCAGAAGGTGTTGGGGATTGAGGAGCAGTTCGCGCAGATGGGGGTTGGTGTGGGGCAGAAGCAGCAGCAGCAGGATGAGGGTTTTGTTTTGCTATCTTCGCCGCCTCCCCCGCCGGTTCCCGCGACCCTCGCCGCCGTGGGTGTGCCAATTGGGCCCGCCACGGTGGTTGCTGGGGAGTATCATAACCGCGTTGTCTCCGATGATGAGAGATCAGATCATGGGGTTTCTGTTGGGTATAGAAAACCACCCACTCCTCCACCACAGGTTCAGTCACAGACACAAGCACAGTCACAGGCACAAACGCAAACACTTGCTCCTCAATTTCAACAGAAGTCAACTGGTGGTGGCGCCGTTGTTGATTTGCCTTCTCCTGATTCAGTTTCAAGTGATAGTAGTCTTGCGAATGCAATCTCGCGTTCGAAACCTGCTGTTTATCAAGAACAAGTTCAGATTCAATCCGGGACTACAAGGGTTCCCAGTAACCCTGTGGATCCAAAGCTTAATGTGTCTGATCCGCACAGTCGGATCCAGATgcagcaacatgtacaggaccctggatatttgttgcaacaacaatttgaacagcaccagcagttgcagtcacaacaaccgcaacagcaatttgaacagcaacatcaccagcaccagcagacactaccgcaacagcagcaacagTTTATTCATGGCACACACTTTATTCACCATAACCCTGCTATTCCTGCATATTATCCTGTATATCCTTCCCAGCAACATCCCCAGCATCCACAGGTTTACTATGTGACTGCGAGACAGGCGCAGGCTTACAACCTGCCTGTGCAGCAGGCTAATATGGGTGAGTCTGCAGGGAACATCGCCTCTAGCCGACCACAAACTCCACCAAATCCTTCTACATTGGTTCAACAACCTGCTACTTACAACCCCATCAGAAATGCTCCCATGCCTAAAACTGAAATGAATGCTTACAGAGCTGCAACTGCAGGCACCCCTCAACTTGTTCAAGTTCCTACGAGCCAACATCAGCAGCAGTATGTCACATACTCACAGATTCACCATCCTTCTCAGTCCATGGCTCCCAATTCTGCTGCCCCTGCCAATTATGCTTTTGATTATGCGGATCCTGCTCATGCTCAAATATACTACTCTCAACCTATGGCACCCACAATGCCTTCACAGTACCAGACTATGATGATGCAGGAAGGTTCAGCTCAGCATCCCTCAGACAGCGTGAAGCAGCAGCAGATAAGAACCTCACAACCATTATAA 2124 0.4944 MEAQPPTPSTAPPPLPPHLSYPDSVESSPRSRNTDSWDEPFAPASTKLRLMCSYGGHIVPRPHDKSLCYVGGDTRIIVSERATSLADLSMRLSKTFLNGRPFTLKYQLPNEDLDSLISVTTDEDLENMIDEYDRTAASATSAVKPSRIRLFLFPTKPESTHSIPPQILDTSAKSDDWFLNALNGAGLLNRGFSDSASVNCLLGLDDEVAGNNLEPGSKDGGDGGGGGGVGGGGASQGGSFGNGKNLKQDVHSIPDSPMLETTSSFGSTSSSPSLANLPPIRVHVVEDQKVLGIEEQFAQMGVGVGQKQQQQDEGFVLLSSPPPPPVPATLAAVGVPIGPATVVAGEYHNRVVSDDERSDHGVSVGYRKPPTPPPQVQSQTQAQSQAQTQTLAPQFQQKSTGGGAVVDLPSPDSVSSDSSLANAISRSKPAVYQEQVQIQSGTTRVPSNPVDPKLNVSDPHSRIQMQQHVQDPGYLLQQQFEQHQQLQSQQPQQQFEQQHHQHQQTLPQQQQQFIHGTHFIHHNPAIPAYYPVYPSQQHPQHPQVYYVTARQAQAYNLPVQQANMGESAGNIASSRPQTPPNPSTLVQQPATYNPIRNAPMPKTEMNAYRAATAGTPQLVQVPTSQHQQQYVTYSQIHHPSQSMAPNSAAPANYAFDYADPAHAQIYYSQPMAPTMPSQYQTMMMQEGSAQHPSDSVKQQQIRTSQPL 707
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g02541 707 MobiDBLite consensus disorder prediction 685 707 - -
Gma10g02541 707 MobiDBLite consensus disorder prediction 411 450 - -
Gma10g02541 707 MobiDBLite consensus disorder prediction 1 20 - -
Gma10g02541 707 MobiDBLite consensus disorder prediction 377 403 - -
Gma10g02541 707 CDD PB1_UP2 51 153 - -
Gma10g02541 707 MobiDBLite consensus disorder prediction 24 39 - -
Gma10g02541 707 PANTHER EXPRESSED PROTEIN 8 697 - -
Gma10g02541 707 Pfam PB1 domain 63 154 IPR000270 GO:0005515
Gma10g02541 707 MobiDBLite consensus disorder prediction 370 451 - -
Gma10g02541 707 PANTHER OS05G0427100 PROTEIN-RELATED 8 697 - -
Gma10g02541 707 SUPERFAMILY CAD & PB1 domains 63 163 - -
Gma10g02541 707 ProSiteProfiles PB1 domain profile. 47 155 IPR000270 GO:0005515
Gma10g02541 707 Gene3D - 67 153 - -
Gma10g02541 707 MobiDBLite consensus disorder prediction 1 39 - -
Gma10g02541 707 MobiDBLite consensus disorder prediction 480 509 - -
Gma10g02541 707 SMART PB1_new 62 153 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g02541 Gma-Chr10 52748273 52750589 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g02541 44 265 MAP Kinase Kinase Kinase AT1G79570 33.628 1.79e-24 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g02541 - - gmx:100775954 1179.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g02541 10 52748273 52750589 Gma20g01166 20 38483321 38486042 GST