LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gma10g02541	ATGGAGGCGCAACCGCCAACCCCCTCGACTGCGCCGCCGCCTCTGCCGCCACACCTCAGCTACCCCGACTCCGTGGAATCCTCGCCTCGCTCCCGCAACACCGACTCCTGGGACGAGCCCTTCGCGCCGGCGTCCACCAAGCTCCGTCTCATGTGCAGCTACGGCGGGCACATCGTCCCCCGCCCCCACGACAAGTCCCTCTGCTACGTGGGTGGCGACACGCGCATCATCGTGTCCGAACGCGCCACCTCACTCGCAGACCTCTCCATGCGCCTCTCGAAAACTTTCCTGAACGGAAGACCCTTCACGCTCAAGTACCAGCTCCCCAACGAGGACCTCGATTCCCTCATCTCCGTCACCACCGACGAGGACCTCGAGAACATGATCGACGAGTACGACCGCACCGCCGCCTCCGCCACCTCCGCCGTCAAACCCTCCCGAATCCGCCTCTTCCTCTTTCCCACCAAACCCGAATCCACTCACTCTATCCCTCCCCAAATTCTTGACACGTCAGCCAAATCGGACGATTGGTTTTTGAATGCGTTAAACGGCGCCGGATTGCTTAACCGCGGGTTTTCTGACTCTGCTTCTGTGAATTGCCTTCTTGGACTTGACGACGAGGTTGCCGGGAATAATCTCGAACCCGGTTCGAAGGACggtggggatggtggtggtggtggtggggttggtggcggtggtgCTTCGCAGGGTGGATCTTTCGGGAACGGGAAGAATTTGAAGCAGGATGTTCACTCCATTCCCGATTCGCCCATGCTCGAAACGACGTCGTCGTTTGGGTCCACTTCTTCGTCGCCTTCGCTTGCGAACTTGCCGCCGATTAGGGTTCATGTTGTGGAGGATCAGAAGGTGTTGGGGATTGAGGAGCAGTTCGCGCAGATGGGGGTTGGTGTGGGGCAGAAGCAGCAGCAGCAGGATGAGGGTTTTGTTTTGCTATCTTCGCCGCCTCCCCCGCCGGTTCCCGCGACCCTCGCCGCCGTGGGTGTGCCAATTGGGCCCGCCACGGTGGTTGCTGGGGAGTATCATAACCGCGTTGTCTCCGATGATGAGAGATCAGATCATGGGGTTTCTGTTGGGTATAGAAAACCACCCACTCCTCCACCACAGGTTCAGTCACAGACACAAGCACAGTCACAGGCACAAACGCAAACACTTGCTCCTCAATTTCAACAGAAGTCAACTGGTGGTGGCGCCGTTGTTGATTTGCCTTCTCCTGATTCAGTTTCAAGTGATAGTAGTCTTGCGAATGCAATCTCGCGTTCGAAACCTGCTGTTTATCAAGAACAAGTTCAGATTCAATCCGGGACTACAAGGGTTCCCAGTAACCCTGTGGATCCAAAGCTTAATGTGTCTGATCCGCACAGTCGGATCCAGATgcagcaacatgtacaggaccctggatatttgttgcaacaacaatttgaacagcaccagcagttgcagtcacaacaaccgcaacagcaatttgaacagcaacatcaccagcaccagcagacactaccgcaacagcagcaacagTTTATTCATGGCACACACTTTATTCACCATAACCCTGCTATTCCTGCATATTATCCTGTATATCCTTCCCAGCAACATCCCCAGCATCCACAGGTTTACTATGTGACTGCGAGACAGGCGCAGGCTTACAACCTGCCTGTGCAGCAGGCTAATATGGGTGAGTCTGCAGGGAACATCGCCTCTAGCCGACCACAAACTCCACCAAATCCTTCTACATTGGTTCAACAACCTGCTACTTACAACCCCATCAGAAATGCTCCCATGCCTAAAACTGAAATGAATGCTTACAGAGCTGCAACTGCAGGCACCCCTCAACTTGTTCAAGTTCCTACGAGCCAACATCAGCAGCAGTATGTCACATACTCACAGATTCACCATCCTTCTCAGTCCATGGCTCCCAATTCTGCTGCCCCTGCCAATTATGCTTTTGATTATGCGGATCCTGCTCATGCTCAAATATACTACTCTCAACCTATGGCACCCACAATGCCTTCACAGTACCAGACTATGATGATGCAGGAAGGTTCAGCTCAGCATCCCTCAGACAGCGTGAAGCAGCAGCAGATAAGAACCTCACAACCATTATAA	2124	0.4944	MEAQPPTPSTAPPPLPPHLSYPDSVESSPRSRNTDSWDEPFAPASTKLRLMCSYGGHIVPRPHDKSLCYVGGDTRIIVSERATSLADLSMRLSKTFLNGRPFTLKYQLPNEDLDSLISVTTDEDLENMIDEYDRTAASATSAVKPSRIRLFLFPTKPESTHSIPPQILDTSAKSDDWFLNALNGAGLLNRGFSDSASVNCLLGLDDEVAGNNLEPGSKDGGDGGGGGGVGGGGASQGGSFGNGKNLKQDVHSIPDSPMLETTSSFGSTSSSPSLANLPPIRVHVVEDQKVLGIEEQFAQMGVGVGQKQQQQDEGFVLLSSPPPPPVPATLAAVGVPIGPATVVAGEYHNRVVSDDERSDHGVSVGYRKPPTPPPQVQSQTQAQSQAQTQTLAPQFQQKSTGGGAVVDLPSPDSVSSDSSLANAISRSKPAVYQEQVQIQSGTTRVPSNPVDPKLNVSDPHSRIQMQQHVQDPGYLLQQQFEQHQQLQSQQPQQQFEQQHHQHQQTLPQQQQQFIHGTHFIHHNPAIPAYYPVYPSQQHPQHPQVYYVTARQAQAYNLPVQQANMGESAGNIASSRPQTPPNPSTLVQQPATYNPIRNAPMPKTEMNAYRAATAGTPQLVQVPTSQHQQQYVTYSQIHHPSQSMAPNSAAPANYAFDYADPAHAQIYYSQPMAPTMPSQYQTMMMQEGSAQHPSDSVKQQQIRTSQPL	707

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Annotation information

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Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Gma10g02541	707	MobiDBLite	consensus disorder prediction	685	707	-	-
Gma10g02541	707	MobiDBLite	consensus disorder prediction	411	450	-	-
Gma10g02541	707	MobiDBLite	consensus disorder prediction	1	20	-	-
Gma10g02541	707	MobiDBLite	consensus disorder prediction	377	403	-	-
Gma10g02541	707	CDD	PB1_UP2	51	153	-	-
Gma10g02541	707	MobiDBLite	consensus disorder prediction	24	39	-	-
Gma10g02541	707	PANTHER	EXPRESSED PROTEIN	8	697	-	-
Gma10g02541	707	Pfam	PB1 domain	63	154	IPR000270	GO:0005515
Gma10g02541	707	MobiDBLite	consensus disorder prediction	370	451	-	-
Gma10g02541	707	PANTHER	OS05G0427100 PROTEIN-RELATED	8	697	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Gma10g02541	Gma-Chr10	52748273	52750589	Dispersed/Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Gma10g02541	44	265	MAP Kinase Kinase Kinase	AT1G79570	33.628	1.79e-24	107

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Gma10g02541	-		-	gmx:100775954	1179.85

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Event-related genes

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Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Gma10g02541	10	52748273	52750589	Gma20g01166	20	38483321	38486042	GST

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