Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g02537 atgctaagagagaagggaacaattgatggaaatgctatgccagattcAGGGGAATCAACTCCTATGAGCTCTTACAACTATCATTATCACTGTTTATTTGATGAGAGAAAACGCTCAATTGTTTGGACTCCTGAGTTGCACTTAAAGTTCACAGAAGCCATGCATATGATAGGAGAGAATACGGCTCGTCCTAAACAAATACTAAGTTTGATGAATGAGCCTTACCTCACTGTTCGCCAGGTTGCAAGTCATCTACAGAAACACAGATCGCGGTTGAAACATAAAGAGAATGCTCACAATACTAATTTGCCTTCACTAAGCACATCATCATCCTTAAGCCACAAAGCCAAGTTTCCCTTACCACCCAAAGAGTCCACTTCAGGAGCAAAAGAACATAAGAGAGCATTCGATCCAAGTGTCTCAACACCAAAGGCTTCCTTCAATGAGAACCACAACCAAAACCAGTTTTTTGTGAACAACATTGGAATTGAAGAATCAAATATTCTTCCAGTGGATCAAAACCAACCTGCTATCGAGTACAATGATCTCATAAAAAAGTTTGTAGAAGACTGTGACAATTTTGATTTGTTTGAAAACGAAACTAATCCCGATGATGTTGATCAATACTCTGAGATGCTAAGAACAATTCTAGATGGTAGCAGTTCCAGTCCTTGGTAA 678 0.3643 MLREKGTIDGNAMPDSGESTPMSSYNYHYHCLFDERKRSIVWTPELHLKFTEAMHMIGENTARPKQILSLMNEPYLTVRQVASHLQKHRSRLKHKENAHNTNLPSLSTSSSLSHKAKFPLPPKESTSGAKEHKRAFDPSVSTPKASFNENHNQNQFFVNNIGIEESNILPVDQNQPAIEYNDLIKKFVEDCDNFDLFENETNPDDVDQYSEMLRTILDGSSSSPW 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g02537 225 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 35 155 - -
Gma10g02537 225 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 37 91 IPR006447 GO:0003677
Gma10g02537 225 Pfam Myb-like DNA-binding domain 42 88 IPR001005 -
Gma10g02537 225 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 35 155 IPR044841 GO:0003700|GO:0006355
Gma10g02537 225 Gene3D - 34 95 - -
Gma10g02537 225 SUPERFAMILY Homeodomain-like 36 94 IPR009057 -
Gma10g02537 225 MobiDBLite consensus disorder prediction 86 148 - -
Gma10g02537 225 MobiDBLite consensus disorder prediction 99 115 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g02537 Gma-Chr10 52691806 52693623 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g02537 31 94 G2-like Transcription Factor Family AT5G44190 50.000 4.15e-13 65.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Gma10g02537 Myb_DNA-binding 1.3e-05 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g02537 - - ccaj:109795563 228.024