Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g02532 ATGGGTTTGCAAAACCAATTAAACGACGTGTCGTCGGGTTCGATTCCGCTTCTGGTGTTGGCGCAGATAGCCACCTGCGTCAACTACCTCCGCTCCATGCTTTTCGCGCTTTTGCAAACCCTAGGTCTCAGCCGATTCCACTCCGACCAGATCGTCGACGAGCGCTTCCTCGCCGCCGTCGGATCCGGCCTCGCCGGACTTATCATGCTCTCCGATCAGCTCACCCTCAGCAGCCAATTCTTCCACCATCACCACGGCACCGCCGCCGGCCACGACCACGACCACGACCACCACCCCTGCGTCGTGTGCCAGGCCACCTTCGAGGACGGCGACCAGGTCCGCATGCTCCCCTGCCGCCACGTCTTCCACCGCCGATGCTTCGACGGCTGGCTCCACCACTACAAGTTCAACTGCCCACTCTGCCGCTCTCCGCTCTTCTCCGACGAGCGCGTGGCACTCACGGAGCGCCGCCTCGGCCAGCAACTCATCTCTTGGTTCTCCCTACACTGA 510 0.6235 MGLQNQLNDVSSGSIPLLVLAQIATCVNYLRSMLFALLQTLGLSRFHSDQIVDERFLAAVGSGLAGLIMLSDQLTLSSQFFHHHHGTAAGHDHDHDHHPCVVCQATFEDGDQVRMLPCRHVFHRRCFDGWLHHYKFNCPLCRSPLFSDERVALTERRLGQQLISWFSLH 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g02532 169 SUPERFAMILY RING/U-box 91 148 - -
Gma10g02532 169 SMART ring_2 100 141 IPR001841 -
Gma10g02532 169 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 85 156 IPR013083 -
Gma10g02532 169 Pfam Ring finger domain 100 142 IPR001841 -
Gma10g02532 169 PANTHER RING ZINC FINGER PROTEIN-RELATED 1 167 - -
Gma10g02532 169 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RHA2A 1 167 - -
Gma10g02532 169 ProSiteProfiles Zinc finger RING-type profile. 100 142 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g02532 Gma-Chr10 52631210 52632431 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g02532 1 169 C3H Transcription Factor Family AT1G15100 46.746 6.88e-45 143
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g02532 K16282 - gmx:100803789 323.939
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g02532 10 52631210 52632431 Gma20g01174 20 38612385 38612882 GST