Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gma10g02532 | ATGGGTTTGCAAAACCAATTAAACGACGTGTCGTCGGGTTCGATTCCGCTTCTGGTGTTGGCGCAGATAGCCACCTGCGTCAACTACCTCCGCTCCATGCTTTTCGCGCTTTTGCAAACCCTAGGTCTCAGCCGATTCCACTCCGACCAGATCGTCGACGAGCGCTTCCTCGCCGCCGTCGGATCCGGCCTCGCCGGACTTATCATGCTCTCCGATCAGCTCACCCTCAGCAGCCAATTCTTCCACCATCACCACGGCACCGCCGCCGGCCACGACCACGACCACGACCACCACCCCTGCGTCGTGTGCCAGGCCACCTTCGAGGACGGCGACCAGGTCCGCATGCTCCCCTGCCGCCACGTCTTCCACCGCCGATGCTTCGACGGCTGGCTCCACCACTACAAGTTCAACTGCCCACTCTGCCGCTCTCCGCTCTTCTCCGACGAGCGCGTGGCACTCACGGAGCGCCGCCTCGGCCAGCAACTCATCTCTTGGTTCTCCCTACACTGA | 510 | 0.6235 | MGLQNQLNDVSSGSIPLLVLAQIATCVNYLRSMLFALLQTLGLSRFHSDQIVDERFLAAVGSGLAGLIMLSDQLTLSSQFFHHHHGTAAGHDHDHDHHPCVVCQATFEDGDQVRMLPCRHVFHRRCFDGWLHHYKFNCPLCRSPLFSDERVALTERRLGQQLISWFSLH | 169 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gma10g02532 | 169 | SUPERFAMILY | RING/U-box | 91 | 148 | - | - | |
Gma10g02532 | 169 | SMART | ring_2 | 100 | 141 | IPR001841 | - | |
Gma10g02532 | 169 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 85 | 156 | IPR013083 | - | |
Gma10g02532 | 169 | Pfam | Ring finger domain | 100 | 142 | IPR001841 | - | |
Gma10g02532 | 169 | PANTHER | RING ZINC FINGER PROTEIN-RELATED | 1 | 167 | - | - | |
Gma10g02532 | 169 | PANTHER | E3 UBIQUITIN-PROTEIN LIGASE RHA2A | 1 | 167 | - | - | |
Gma10g02532 | 169 | ProSiteProfiles | Zinc finger RING-type profile. | 100 | 142 | IPR001841 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gma10g02532 | Gma-Chr10 | 52631210 | 52632431 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gma10g02532 | 1 | 169 | C3H Transcription Factor Family | AT1G15100 | 46.746 | 6.88e-45 | 143 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gma10g02532 | K16282 | - | gmx:100803789 | 323.939 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Gma10g02532 | 10 | 52631210 | 52632431 | Gma20g01174 | 20 | 38612385 | 38612882 | GST |