Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g02525 atggagcaagagaatcacaaaatcaaagcagtgagtttgcttcgaagcagaatctgtGATCCCAAATTCATCTTCATCAGTGAATCTCCAGAAAGCAACTACAGCAAGCTGAAATTCATGATATCGAGTTCGGTAACGGAAGCATGCAACAATTCTATTCTTCTTCTCGGTCCCCGCGGCTCCGGCAAGAATGCGGTTTTGGAGCTTGTCATTCAAGATTTGCTGCAAGAGTATCCGGACTCGGTCTCAGTGATAAGGTTGAATGGGCTTTTACATAGTGATGACATCTCTGCGTTCAAGGAAATAGCTAGGCAGTTATGCATGGAGCATCAATTGCTATTCTCAAAAGCGGCATCATTTGATGACAACTCCCAATTTATGGTGGCCATCCTAAAGGAATGTGGATTAGCACATAAAACAGTAATTTTTGTTCTGGATGAGTTTCACCTGTTTGCTCAGGGTAAACAGAGATTACTCTATAGCTTGCTAGATGCAATGCAATCAATAACATCACAGGCTGTTGTACTTGGCATTAGTTGCCGTCTGGATGCAGATCAGCTGTTGGAGAAAAGGGTACGATCTCGTTTTTCACATAGAAAGCTGTTGTTCCTACCACCTTCAATAGAAGATTCACAAAAATTACTGATGCACATCCTGACATTACCAATTGATTCAAGCTTTCCACATGCTTATGCTGTTGAATTTAACAGAAAGGTCCAAAATATTATAGAAGATAGAAGGTTCAAAGAAACCCTCAATAAATATTTAAATGTTGACTCCTCTGTCAAACATTTGCTGAGGTTCCTATTCTGTGCAGTCTCTCATATGGATTTGCAGACTGGGTTCCTGTCTCGGGAGAACTTTGAAATTGCATTTACAAGTATCCAGAGGCAGCCCAAACTGGAATGTTTAAGAAATTGCTCCATTTTAGAACTCCAAATTTTGGTTTGCATGAAGAGATTGGAAGTTAAAGAGCAAAGTTTATGCAACTTCAATTCTGTGATGAAAGTAAATGATGCCATTTATCCCCAACCCCAAACTTATTTGGTGGTATTTTTTACCTTTTGTGTGCAGGCATTTGAACACCTTATACATCGTGAATTGATATGTTTCACAGACAATAGAGGACAAAGTTTGTCTGTTGAATTCCGTCCTGTAAAGCTTTTAATTTCATCTGCTGAACTACATCAAGGACTAAGAGCAAATACTTCATGCCCTCCTAAGCTTCTAAAATTAATGGATCGTGAAGGCTAA 1254 0.3756 MEQENHKIKAVSLLRSRICDPKFIFISESPESNYSKLKFMISSSVTEACNNSILLLGPRGSGKNAVLELVIQDLLQEYPDSVSVIRLNGLLHSDDISAFKEIARQLCMEHQLLFSKAASFDDNSQFMVAILKECGLAHKTVIFVLDEFHLFAQGKQRLLYSLLDAMQSITSQAVVLGISCRLDADQLLEKRVRSRFSHRKLLFLPPSIEDSQKLLMHILTLPIDSSFPHAYAVEFNRKVQNIIEDRRFKETLNKYLNVDSSVKHLLRFLFCAVSHMDLQTGFLSRENFEIAFTSIQRQPKLECLRNCSILELQILVCMKRLEVKEQSLCNFNSVMKVNDAIYPQPQTYLVVFFTFCVQAFEHLIHRELICFTDNRGQSLSVEFRPVKLLISSAELHQGLRANTSCPPKLLKLMDREG 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g02525 417 PIRSF ORC4 2 417 IPR016527 GO:0000808|GO:0003677|GO:0005634|GO:0006260
Gma10g02525 417 Pfam AAA ATPase domain 35 168 IPR041664 -
Gma10g02525 417 Gene3D - 30 205 IPR027417 -
Gma10g02525 417 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 44 262 IPR027417 -
Gma10g02525 417 Pfam Origin recognition complex (ORC) subunit 4 C-terminus 214 336 IPR032705 -
Gma10g02525 417 PANTHER ORIGIN RECOGNITION COMPLEX SUBUNIT 4 9 416 IPR016527 GO:0000808|GO:0003677|GO:0005634|GO:0006260
Gma10g02525 417 CDD AAA 51 199 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g02525 Gma-Chr10 52557272 52561437 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g02525 1 414 Core DNA Replication Machinery Family AT2G01120 62.175 0.0 528
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g02525 K02606 - gmx:100800582 767.689
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g02525 10 52557272 52561437 Gma20g01181 20 38717701 38722332 GST