Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g02498 ATGGCGGGTTCTGGCGGGAAAAAGGTGCACCAAATGATCGTCGGTTTCGGCGGCAGTGGCCTCGGCCAGGTTGTCATCGCCGTCGCCGTCTCTTTCCTCGTCCGCGTCTTCTCCGCTCCCGGCCCGGCCCTCTCgccggagaacgaagctgacgacgtgccggagaacgattccgacgacgCAGAAGCTCCAACTTCCGGCAAGGTCACGCCGGTCACAATCCAGTGGAGAAACATCAATTGCTCCCTTTCTGATAAATCTTCCAAGTCCGCGAGGTTTCTGCTTAAAAATGTGAGTGGAGAAGCTAAGCCTGGAAGATTATTAGCCATAATGGGACCTTCAGGTTCAGGGAAGACGACGTTGCTTAATGTTCTTGCGGGTCAGCTAACAGCATCTCCTCGGTTGCATCTGAGTGGCGTTTTGGAGTTCAATGGAAAGCCTGGTTCCAAGAATGCTTACAAgtttgcttatgtgagacaGGAGGATCTCTTTTTCTCGCAGCTCACAGTGCGGGAGACATTGTCTCTTGCTACAGAACTCCAGCTTCCCAACATATCTTCTGCAGAAGAGAGGGATGAATTCGTGAACAATCTCCTTTTCAAACTAGGCTTGGTTAGCTGTGCTGATACCAATGTTGGTGATGCAAAAGTTCGTGGAATTAGTGGTGGTGAAAAGAAACGCTTATCCATGGCATGTGAACTGCTTGCAAGCCCATCTGTTATATTTGCTGATGAACCCACAACAGGACTTGATGCCTTCCAGGCTGAGAAAGTCATGGAAACTCTCCAACAACTTGCACAAGATGGTCATACTGTAATTTGTTCTATACATCAGCCAAGAGGGTCAGTGTATAGTAAATTTGACGACATCATCTTGCTAACAGAGGGTTCACTTGTTTATGCTGGTCCTGCTCGTGATGAACCACTGGCATACTTCTCAAAATTTGGGTACCAATGTCCAGATCATATAAATCCTGCTGAATTTTTGGCTGATCTTATATCCATAGACTACAGTTCTGCTGATAGTGTCTATACCTCTCAAAAAAGGATTGATGGTCTTGTTGAGTCATTCTCACAAAGACAATCTGCAGTTATATATGCAACTCCAATTACTATAAATGATCTCTCGAACAGTAGAAAAAAAATCAGCCAGAGGGCTGTAGTAAAGAAGAAAGGAGTTTGGTGGAAGCAATTTTGGTTGCTCCTTAAAAGAGCATGGATGCAGGCTTCCCGTGATGCACCAACAAACAAAGTTCGGGCAAGGATGTCAATTGCATCGGCAATTATCTTTGGGTCAGTATTTTGGAGAATGGGAAATTCTCAGACTTCAATACAAGACAGAATGGGATTACTTCAGGTTACTGCAATAAACACAGCTATGGCTGCTCTCACAAAGACTGTTGGTGTGTTTCCAAAGGAACGGGCAATTGTAGATAGAGAACGTGCTAAAGGCTCCTATTCCTTGGGCCCCTATCTGTTCTCAAAATTGTTGGCTGAGATTCCCATTGGAGCAGCATTTCCATTAATGTTTGGTGCTGTTTTGTATCCAATGGCACGTCTTCATCCTACTATGCAAAGATTTGGGAAATTCTGTGGCATTGTTACTATGGAATCTTTTGCTGCATCTGCTATGGGTCTTACTGTTGGTGCTATGGTTCCAACCACTGAAGCAGCAATGGCAGTAGGCCCCTCTCTCATGACAGTTTTTATTGTATTTGGAGGGTACTATGTCAATCCTGAGAATACCCCAATCATCTTCCGTTGGATTCCTAATGTTTCTCTGATTAGATGGGCTTTTCAGGGACTTTCTATCAATGAATTTAGTGGTCTTCAATTTGACCATCAGCATTCATTTGATATTCAAACTGGAGAACAGGCACTAGAGCGTATTTCCTTTGGAAAAAGTAGGATTAGGGATACGGTGATAGCACAAAATAGAATACTGCTATTTTGGTATTGCACCACCTACCTTCTCCTCGAGAAAAACAAGCCCAAATACCAGCAACTTGAAAGCCCTATTGACCACAGCAAACCTCATTTAAAACTTGAGGAGCTCAATTCTGAACAAGTTGATCAGACAATTGAAGCTCCGCCAGTCAGTCAACTTGATTCCAAACAGCCCCTCGAGTCACCTGAAGTAGATCTTGTTGGCTCTTTTGTCCTTGAAGGTTTGTAA 2175 0.4285 MAGSGGKKVHQMIVGFGGSGLGQVVIAVAVSFLVRVFSAPGPALSPENEADDVPENDSDDAEAPTSGKVTPVTIQWRNINCSLSDKSSKSARFLLKNVSGEAKPGRLLAIMGPSGSGKTTLLNVLAGQLTASPRLHLSGVLEFNGKPGSKNAYKFAYVRQEDLFFSQLTVRETLSLATELQLPNISSAEERDEFVNNLLFKLGLVSCADTNVGDAKVRGISGGEKKRLSMACELLASPSVIFADEPTTGLDAFQAEKVMETLQQLAQDGHTVICSIHQPRGSVYSKFDDIILLTEGSLVYAGPARDEPLAYFSKFGYQCPDHINPAEFLADLISIDYSSADSVYTSQKRIDGLVESFSQRQSAVIYATPITINDLSNSRKKISQRAVVKKKGVWWKQFWLLLKRAWMQASRDAPTNKVRARMSIASAIIFGSVFWRMGNSQTSIQDRMGLLQVTAINTAMAALTKTVGVFPKERAIVDRERAKGSYSLGPYLFSKLLAEIPIGAAFPLMFGAVLYPMARLHPTMQRFGKFCGIVTMESFAASAMGLTVGAMVPTTEAAMAVGPSLMTVFIVFGGYYVNPENTPIIFRWIPNVSLIRWAFQGLSINEFSGLQFDHQHSFDIQTGEQALERISFGKSRIRDTVIAQNRILLFWYCTTYLLLEKNKPKYQQLESPIDHSKPHLKLEELNSEQVDQTIEAPPVSQLDSKQPLESPEVDLVGSFVLEGL 724
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g02498 724 SMART AAA_5 104 297 IPR003593 -
Gma10g02498 724 Pfam ABC-2 type transporter 397 607 IPR013525 GO:0016020|GO:0140359
Gma10g02498 724 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 74 306 IPR027417 -
Gma10g02498 724 CDD ABCG_EPDR 71 302 - -
Gma10g02498 724 MobiDBLite consensus disorder prediction 44 67 - -
Gma10g02498 724 Pfam ABC transporter 95 247 IPR003439 GO:0005524
Gma10g02498 724 PANTHER ATP-BINDING CASSETTE TRANSPORTER 3 675 - -
Gma10g02498 724 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 74 320 IPR003439 GO:0005524
Gma10g02498 724 PANTHER ABC TRANSPORTER G FAMILY MEMBER 7 3 675 - -
Gma10g02498 724 ProSitePatterns ABC transporters family signature. 220 234 IPR017871 GO:0005524
Gma10g02498 724 Gene3D - 65 309 IPR027417 -
Gma10g02498 724 Pfam ABC-2 type transporter 277 348 IPR043926 GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g02498 Gma-Chr10 52371963 52379619 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g02498 94 302 Calmodulin-binding Proteins AT2G36910 27.700 5.49e-10 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g02498 K05681 - gmx:100788256 1423.68
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g02498 10 52371963 52379619 Gma20g01205 20 38914704 38921957 GST