Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g02487 ATGGCAATTCAGCACCACAATGACCAACTAGAGCATAATGAAAATGTCTCATCTGTCCTTGATGCCCTTTACTGTGACGAAGGAAAGTGGGAAGAGGAAGAGGAGGAGAAAGAAGAAGAAGAAGATGAAGGTGAAAATGAAAGTGAAGTGACAACAAACACTGCAACTTGTCTTTTCCCTCTGCTCTTGTTGGAGCAAGACTTGTTCTGGGAAGATGAGGAACTAAACTCTATCTTTTCCAAAGAGAAGGTTCAACATGAAGAAGCCTATGGCTATAACAATctgaacagtgatgatgataataacaacaacaacaatactagtaataataaTGTGCATTTGGACTCTTGTCTCTCTCAGCCTCGTCGTGAGGCAGTGGAATGGATGCTGAAAGTCAATGCTCACTATGGATTCTCTGCTCTCACTGCAACACTGGCCGTTACTTATCTGGATAGGTTCCTTCTAAGCTTCCATTTTCAAAGAGAGAAGCCATGGATGATCCAGCTTGTGGCTGTCACTTGCATCTCTTTGGCTGCAAAAGTTGAAGAAACTCAAGTGCCTCTTCTCTTGGACCTTCAAGTGCAAGACACAAAGTATTTGTTTGAGGCAAAGACTATTCAGAGAATGGAGCTTCTGGTGCTGTCCACACTCAAATGGAAGATGCACCCCGTGACACCACTCTCGTTTCTAGATCACATTATAAGAAGGCTTGGATTGAGAACTCATCTTCACTGGGAGTTTCTCAGGCGCTGTGAGCATCTTCTTCTGTCTGTGCTTTTAGATTCAAGATTTGTTGGTTGTCTTCCTTCTGTGTTGGCCACTGCAACAATGCTGCATGTTATAGACCAGATTCAACACAGTGGTGGGATAGAATACAAAACTCAGCTTCTAAGTGTTCTCAAAATTAGCAAGGAGAAAGTAGATGAGTGTTATAATGCAATTCTCCAACTCTCAAAGGCCAATAAATATGGTCATAACAACATCAACAACACTAGCAAGCGCAAGTATGAGCAAATCCCAAGCAGCCCAAGTGGCGTAATTGATGCTGCATTTTGCTCTGATGGTTCCAACGATTCGTGGGCAGTGGGGTCATCATTGTTATATTCACCACCAGAGCCTCTCTTCAAGAAGAGCAGAACCCAAGGACAACAAATGAATTTGTCACCACTTAAACGGTTCATTATCGGAATTTGCCTTCCCCTCTCTATGGGTATCTCTTCATTTCCAACAACGTGCCACATTCATTTAACATATCTTGAAGAGGcAAGGTGGAGGTTCAGGAATGAGTGGTCTATCTCTGAGGGAAGAGGAGGACAAAGTTGGCAATGA 1329 0.4169 MAIQHHNDQLEHNENVSSVLDALYCDEGKWEEEEEEKEEEEDEGENESEVTTNTATCLFPLLLLEQDLFWEDEELNSIFSKEKVQHEEAYGYNNLNSDDDNNNNNNTSNNNVHLDSCLSQPRREAVEWMLKVNAHYGFSALTATLAVTYLDRFLLSFHFQREKPWMIQLVAVTCISLAAKVEETQVPLLLDLQVQDTKYLFEAKTIQRMELLVLSTLKWKMHPVTPLSFLDHIIRRLGLRTHLHWEFLRRCEHLLLSVLLDSRFVGCLPSVLATATMLHVIDQIQHSGGIEYKTQLLSVLKISKEKVDECYNAILQLSKANKYGHNNINNTSKRKYEQIPSSPSGVIDAAFCSDGSNDSWAVGSSLLYSPPEPLFKKSRTQGQQMNLSPLKRFIIGICLPLSMGISSFPTTCHIHLTYLEEARWRFRNEWSISEGRGGQSWQ 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g02487 442 ProSitePatterns Cyclins signature. 122 153 IPR006671 -
Gma10g02487 442 MobiDBLite consensus disorder prediction 29 48 - -
Gma10g02487 442 SUPERFAMILY Cyclin-like 225 335 IPR036915 -
Gma10g02487 442 Pfam Cyclin, N-terminal domain 119 221 IPR006671 -
Gma10g02487 442 Gene3D - 115 222 - -
Gma10g02487 442 MobiDBLite consensus disorder prediction 29 51 - -
Gma10g02487 442 PANTHER CYCLINS 40 358 IPR039361 -
Gma10g02487 442 PANTHER CYCLIN-D3-1 40 358 - -
Gma10g02487 442 MobiDBLite consensus disorder prediction 92 114 - -
Gma10g02487 442 CDD CYCLIN 122 214 IPR013763 -
Gma10g02487 442 Coils Coil 27 47 - -
Gma10g02487 442 SMART Cyclin_C_2 224 355 IPR004367 -
Gma10g02487 442 SMART cyclin_7 127 215 IPR013763 -
Gma10g02487 442 Gene3D - 223 314 - -
Gma10g02487 442 Pfam Cyclin, C-terminal domain 224 337 IPR004367 -
Gma10g02487 442 SUPERFAMILY Cyclin-like 116 222 IPR036915 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g02487 Gma-Chr10 52256917 52258977 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g02487 1 335 Core Cell Cycle Gene Families AT4G34160 52.537 5.04e-113 335
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g02487 K14505 - gmx:100782569 724.931
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g02487 10 52256917 52258977 Gma20g01217 20 39023711 39026146 GST
Gma01g01926 01 54777639 54778932 Gma10g02487 10 52256917 52258977 PCT
Gma11g00479 11 4013612 4015682 Gma10g02487 10 52256917 52258977 PCT