Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g02459 ATGATGATCACAGAAGATGAAACGACTCTTACAGCAAGCAAAGAACAACAAAGTGAAATGATGAACGGAGACAAGGACAATCATGGAAGCGAAGATGACAACTCCAAAGAGTGGTTGAACCTGAGCATAGGTGGAACTACTACTTTACTCTCAACAGCTGTACCACCAGCCACTGCCAAAGTTTTTTCATGCAACTTCTGCATGAGGAAGTTCTTTAGCTCACAGGCACTAGGAGGCCATCAGAACGCTCACAAGAGGGAAAGGGGTGCTGCCAGAAGATACCAATCTCAGAGGTCGATGGCAATAATGGGATTCTCCATGAACACACTAACTATGTGTCGATCACTTGGTGTTCAGCCACACTCACTTGTGCACAAGCCATGCAGAGATGGTATCATGGTGGCACCGAGCTTTCATGATGCATATGCAAGGATTGGGATGGCATGGACACCTTTCTGGACCGAGGATCAAGCGGATATGGTGTGGCCAGGCAGCTTTCGCTTGGTTCCAAAACAGCCACAGTCACCACAGGAGCCACTCAAGCTTGATTTAGACCTCAGACTCTGA 567 0.4762 MMITEDETTLTASKEQQSEMMNGDKDNHGSEDDNSKEWLNLSIGGTTTLLSTAVPPATAKVFSCNFCMRKFFSSQALGGHQNAHKRERGAARRYQSQRSMAIMGFSMNTLTMCRSLGVQPHSLVHKPCRDGIMVAPSFHDAYARIGMAWTPFWTEDQADMVWPGSFRLVPKQPQSPQEPLKLDLDLRL 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g02459 188 PANTHER ZINC FINGER PROTEIN 4-LIKE 5 188 - -
Gma10g02459 188 ProSitePatterns Zinc finger C2H2 type domain signature. 64 84 IPR013087 -
Gma10g02459 188 Gene3D Classic Zinc Finger 46 109 - -
Gma10g02459 188 MobiDBLite consensus disorder prediction 1 37 - -
Gma10g02459 188 ProSiteProfiles Zinc finger C2H2 type domain profile. 62 89 IPR013087 -
Gma10g02459 188 MobiDBLite consensus disorder prediction 19 35 - -
Gma10g02459 188 PANTHER ZINC FINGER PROTEIN 4-LIKE 5 188 - -
Gma10g02459 188 SUPERFAMILY beta-beta-alpha zinc fingers 59 88 IPR036236 -
Gma10g02459 188 MobiDBLite consensus disorder prediction 1 18 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g02459 Gma-Chr10 52072723 52074193 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g02459 57 176 C2H2 Transcription Factor Family AT1G24625 43.548 1.06e-21 86.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g02459 - - gmx:100306296 384.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g02459 10 52072723 52074193 Gma20g01251 20 39284351 39285515 GST