Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g02449 ATGCTGCGTTTGTGCTACGGCCCTCTGGATTGCTGCTTCCGACGCCGCCGTGCCGACGGACTCCTCTGGCACACCGACTTGAAGCCCCACGCCTCCGGCGACTTCTCCATCGCCGTCGCCCAGGCCAATTACTGTCTCGAGGATCAGAGCCAAGTCTTCACCTCCCCCTACGCCACCTACGTCGGCGTCTACGACGGCCACGGCGGCCCCGAAGCTTCTCGATTCGTCAACAAGCGCCTCTTCCCTTATTTGCACAAATTCGCCACTGAGCAAGGAGGGTTGTCTGTGGATGTGATAAAAAAGGCATTCAGTGCCACAGAGGAGGAATTCTTGCATTTGGTGAAGCTATCCTTGCCCATTAGTCCCCAGATTGCTTCCGTCGGATCCTGTTGCCTTTTTGGTGCAATTTCTAATAATGTGTTGTATGTTGCCAACCTCGGCGACTCGAGAGCTGTTCTTGGCAGGAGGGATACGGTGAGAAAGAACAGTCCAGTGGTGGCACAGCGTTTGTCAACAGATCATAATGTAGCTGATGAAGAGGTGAGAAAAGAAGTTGAAGCTCTCCATCCTGATGACTCGCACATTGTGGTTTATAACCGTGGAGTTTGGAGGATTAAGGGCATTATACAGGTGTCAAGATCTATCGGTGACGTGTATTTGAAGAAACCTGATTTCTACCGAGACCCGGTTTTTCAGCAGTTTGGAAATCCTATTCCTTTGAAGCGTCCTGTAATGACAGCTGAACCATCAATCATTATTAGGGAGCTTGAGTCTCAGGATTTATTCTTGATATTTGCATCAGATGGCCTCTGGGAACAATTAAGTGACGAGGCAGCAGTTCAGATCGTTTTCAAACATCCAAGAGCTGGAATTGCCAAGAGACTGGTGAGAGCTGCTCTTCATGAAGCTGCAAAGAAGAGAGAGATGAGATACGATGACATAAAGAAAATTGACAAAGGAATAAGACGACACTTCCATGATGATATCACTGTAGTTGTAATCTATCTTGATCACCATGCAGGCTCCTCTAATGGTAGATTTAAGCAAACTGGTGTTGACTATACAACTGCCCCTGTTGATATTTTTTCCCTTAATGCGGATGAAGCAGAAAAGCGTATGCTTGGTACAGTTGCCTAA 1137 0.4785 MLRLCYGPLDCCFRRRRADGLLWHTDLKPHASGDFSIAVAQANYCLEDQSQVFTSPYATYVGVYDGHGGPEASRFVNKRLFPYLHKFATEQGGLSVDVIKKAFSATEEEFLHLVKLSLPISPQIASVGSCCLFGAISNNVLYVANLGDSRAVLGRRDTVRKNSPVVAQRLSTDHNVADEEVRKEVEALHPDDSHIVVYNRGVWRIKGIIQVSRSIGDVYLKKPDFYRDPVFQQFGNPIPLKRPVMTAEPSIIIRELESQDLFLIFASDGLWEQLSDEAAVQIVFKHPRAGIAKRLVRAALHEAAKKREMRYDDIKKIDKGIRRHFHDDITVVVIYLDHHAGSSNGRFKQTGVDYTTAPVDIFSLNADEAEKRMLGTVA 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g02449 378 PANTHER ALPHABET, ISOFORM E-RELATED 4 373 - -
Gma10g02449 378 Gene3D - 25 345 IPR036457 -
Gma10g02449 378 SUPERFAMILY PP2C-like 44 338 IPR036457 -
Gma10g02449 378 SMART PP2C_4 28 334 IPR001932 -
Gma10g02449 378 ProSitePatterns PPM-type phosphatase domain signature. 60 68 IPR000222 GO:0043169
Gma10g02449 378 CDD PP2Cc 47 336 IPR001932 -
Gma10g02449 378 Pfam Protein phosphatase 2C 59 305 IPR001932 -
Gma10g02449 378 PANTHER PROTEIN PHOSPHATASE 2C 63-RELATED 4 373 - -
Gma10g02449 378 ProSiteProfiles PPM-type phosphatase domain profile. 34 336 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g02449 Gma-Chr10 52003770 52007074 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g02449 17 343 PP2C-type Phosphatase Gene Family AT3G51370 58.507 1.71e-144 413
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g02449 - K01102 gmx:100812137 763.066
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g02449 10 52003770 52007074 Gma20g01259 20 39356352 39359338 GST
Gma01g01943 01 54906930 54910141 Gma10g02449 10 52003770 52007074 PCT
Gma11g00464 11 3855400 3859399 Gma10g02449 10 52003770 52007074 PCT