Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g02448 ATGACGAGCGCTTCGGAgctattccacaccagaaggcatcgattgggacgaaatgctctcgatctagggctcgacaccgaactccacgccgccgattctctccgccaactccgccttcgtcactactacctccgccgccaccacccggagcgtgcatctgatagaattgatgggaggtatcggcggtctttcgtaagtgagagcgtggattctgaagaaaacgtgagaagtagtcttagagggaGTAGCAGCGAGAGACTACCCGTAGGTGTGGTTCTTGCACGGGCAAGACTCCTTCAGAGGTTGAGAGGGGAACCTCTATCCACAAACAGGCAATATGATAGAGATTCATTTGGTGAGGATCCAGAAAGTGAATCATCAAACGAAGATCCAAGCGGGGCATCTCTAGTTACTGAGTTGACTTCTCAAATGGCAAGGTCCCAGTTCTTGCAAGAACTAAGCACAAAGCCACCTGGCCTTACTCAAGAGGCCTTGGACTGTTTGCATCAGGAAGTTTTTAGCAGCAATGCCAGTGAGATAGGGTTGGATTCCAGGACTGTCCATACTGTCGAAGATGATAAGAATGCTGTAATGGAGCTGGTTTTTTGTAACGATGCTGAATACTTGTCTCTTACCTTGATATCGATGCTCGAGCTCTCATGA 663 0.3077 MTSASELFHTRRHRLGRNALDLGLDTELHAADSLRQLRLRHYYLRRHHPERASDRIDGRYRRSFVSESVDSEENVRSSLRGSSSERLPVGVVLARARLLQRLRGEPLSTNRQYDRDSFGEDPESESSNEDPSGASLVTELTSQMARSQFLQELSTKPPGLTQEALDCLHQEVFSSNASEIGLDSRTVHTVEDDKNAVMELVFCNDAEYLSLTLISMLELS 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g02448 220 PANTHER SI:CH211-59O9.10 1 179 - -
Gma10g02448 220 MobiDBLite consensus disorder prediction 109 134 - -
Gma10g02448 220 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RHY1A-RELATED 1 179 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g02448 Gma-Chr10 51992080 51995190 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g02448 1 175 C3H Transcription Factor Family AT1G49850 36.000 2.90e-14 67.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g02448 - - gmx:548042 314.694
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g02448 10 51992080 51995190 Gma20g01260 20 39367037 39369785 GST