Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g02437 ATGAGCTGCAATGGTTGTCGAGTCCTCCGAAAGGGTTGCAGTGACGACTGCATGCTACGACATTGCCTACTGTGGATAGAGAACCCACAAGCCCAAGCTCACGCCACCCTCTTCGTCACCAAGTTCTTCGGCCGTGCCACTCTCATGTCTTTCCTTTCCACCGTACCCCCCAACCAAAGATCCGCTTTGTTTGAGTCACTGCTCTATGAAGCAGTGGGGCGTACTATAAATCCAGTGAATGGAGCAGTGGGGCTGTTGTGGACAGGGAACTGGCACCTCTGCCAAATGGGTGTGGAGAAAGTGCTACGAGGTGGTGCTGCTGCTGCGTTGACCCCACTGATCCCTCAAGTAATAACAACGAGTGTGGTGAGAGGTGAAATAATGTGTCACCAGCCAAAGAAGCAATGTGTGGGGACACCCTCTGAGGATGAGGAATCCGAGACCTCCACGTTCGCAAGTAGACCAcaggattctgctcctcaacctcaaaccaacctccttacactattcttctga 516 0.4787 MSCNGCRVLRKGCSDDCMLRHCLLWIENPQAQAHATLFVTKFFGRATLMSFLSTVPPNQRSALFESLLYEAVGRTINPVNGAVGLLWTGNWHLCQMGVEKVLRGGAAAALTPLIPQVITTSVVRGEIMCHQPKKQCVGTPSEDEESETSTFASRPQDSAPQPQTNLLTLFF 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g02437 171 ProSiteProfiles LOB domain profile. 1 107 IPR004883 -
Gma10g02437 171 MobiDBLite consensus disorder prediction 142 164 - -
Gma10g02437 171 Pfam Lateral organ boundaries (LOB) domain 2 99 IPR004883 -
Gma10g02437 171 PANTHER LOB DOMAIN PROTEIN 1 171 - -
Gma10g02437 171 MobiDBLite consensus disorder prediction 133 164 - -
Gma10g02437 171 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 1 171 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g02437 Gma-Chr10 51923030 51924283 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g02437 1 150 AS2 family AT3G49940 60.000 2.30e-57 178
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Gma10g02437 LOB 5e-26 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g02437 10 51923030 51924283 Gma20g01274 20 39450480 39452273 GST
Gma01g01956 01 55016586 55017936 Gma10g02437 10 51923030 51924283 PCT
Gma11g00450 11 3757934 3759228 Gma10g02437 10 51923030 51924283 PCT