Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g02430 ATGGATCCTGTTGAGCAAATTTCTGAAGAGTGGAGTTCTCTTAGTGGATTCTACACAGCTGAGGAAGCTAACTTTATGAGCCAGTTGCTTGGTAACTGCTCACTCCCTGAGAACCTGTGTGGAAATTTCAATTTGGGAATTCCATCTGCAATATGGCCTGGCCATGAATCCACTATAGTGAGCGTGACAGGAATCAATGAAAGTCCATATTTTCATGCAAATGGTGATAACAATAATAATAATTATTTATGTTTTTCACAAGGAAGTAGCTCCACTGCTGATAGTAGCAATATTTTTCCTACTACAAGTGGTAATAGTTACACTTTGAATGATCCAGTGGCCAACATTGGCTACATGTCCACGGATTTTGCCAATTTAGGCCCATGTAATGTTCAAGGGAGTGACAGCCAACAGTTAAATGAAAACACCCATGAAGAGTTAGGTCTAGAGGTTATTGCTGACAAGAAATTGCAGGATCGCCAGGAATGTGAAGTACTTGTTTCTGAAGCAGCAGAAGAGGATATAAACACCAATCTGGAGAAGTCAGGAAAAAGATCTAGGTGCTCAATGCAGGTGCGAAAGAGCAAGAAAAATGTTAAACCTGTGAAGAAACCAAAATCTGATTCTATAAGTAACTCTGAAGAGGGTAGAAGTCCTCATCTTCAGGGTTGCTGCTCAGAGAATGATGACTCCAGTGCTTCTCAGGAGCTAAATGGAGGAGGATCTTCAAGTTTGAGCCTGGAGGATTCTACATCTCTTAAGTTAAAGGGGAAAAAATCAACAGCTAATAGAGGTTCTGCTACTGATCCACAGAGTGTATATGCAAGGAGAAGAAGAGAAAGAATAAATGAAAGGTTGAAAATCCTACAAAACCTTGTCCCCAATGGAACCAAGGTGGATATCAGCACCATGCTTGAGGAAGCTGTCCAATATGTGAAGTTTTTGCAGCTCCAAATTAAGCTTCTGAGCTCTGATGATCTCTGGATGTACTCTCCCATTGCTTACAATGGAATGAACATTGGACTAGACCTCAATATTACCCCAACCAAACAACCATAA 1059 0.407 MDPVEQISEEWSSLSGFYTAEEANFMSQLLGNCSLPENLCGNFNLGIPSAIWPGHESTIVSVTGINESPYFHANGDNNNNNYLCFSQGSSSTADSSNIFPTTSGNSYTLNDPVANIGYMSTDFANLGPCNVQGSDSQQLNENTHEELGLEVIADKKLQDRQECEVLVSEAAEEDINTNLEKSGKRSRCSMQVRKSKKNVKPVKKPKSDSISNSEEGRSPHLQGCCSENDDSSASQELNGGGSSSLSLEDSTSLKLKGKKSTANRGSATDPQSVYARRRRERINERLKILQNLVPNGTKVDISTMLEEAVQYVKFLQLQIKLLSSDDLWMYSPIAYNGMNIGLDLNITPTKQP 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g02430 352 MobiDBLite consensus disorder prediction 177 277 - -
Gma10g02430 352 Pfam Helix-loop-helix DNA-binding domain 276 316 IPR011598 GO:0046983
Gma10g02430 352 MobiDBLite consensus disorder prediction 214 270 - -
Gma10g02430 352 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 8 348 - -
Gma10g02430 352 Gene3D - 266 323 IPR036638 GO:0046983
Gma10g02430 352 SMART finulus 272 321 IPR011598 GO:0046983
Gma10g02430 352 CDD bHLH_AtIND_like 267 329 - -
Gma10g02430 352 PANTHER TRANSCRIPTION FACTOR BHLH54 8 348 - -
Gma10g02430 352 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 266 315 IPR011598 GO:0046983
Gma10g02430 352 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 265 331 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g02430 Gma-Chr10 51856836 51858401 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g02430 10 346 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G14760 38.211 1.21e-57 188
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Gma10g02430 HLH 2.9e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g02430 - - gmx:100805192 666.766
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g02430 10 51856836 51858401 Gma20g01281 20 39515907 39517456 GST