Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g02417 atgccctcctcatcaacaatgccTCTCTCGCCGGACCCTCCCTTCCTCTGCGCCGATGAGGCCGCCATCGCCGGACTCCTCGACGCCGAGCCACACCACATGCCGGAAAAGGACTACCTCCGCCGCTGCCGCGACCGCTCCGTCGACGTCACCGCCCGCTTGGACGCCGTCAACTGGATCTTAAAGGTCCACGCATACTACGAGTTTTCCCCAGTAACGGCGTTTCTCTCCGTCAACTATTTCGACCGTTTCCTCTCTCGATGCTCTCTTCCGCAACAAAGTGGTGGGTGGGCGTTTCAGCTGTTATCAGTGGCATGTTTGTCTCTAGCAGCGAAAATGGAGGAGTCCCATGTGCCTTTCTTACTGGACCTGCAATTGTTTGAGCCCAAGTTCGTCTTCGAGCCCAAAACGATTCAGAGAATGGAACTCTGGGTTATGTCTAATCTCAAATGGAGACTCCGCTCTGTCACCCCCTTCGATTATCTTCATTATTTCATCTCCAAGCTTCCTTCTTCCTCTTCTTCCCAATCCTTGAATCACTTTTTCTCCACTTCCTCCAACCTCATTCTCAGCACCACTCGTGTGATTAACTTCTTGGGATTTGCGCCATCCACCGTCGCAGCCGCCGCCGTGCTCTGCTCCGCCAACGGCCAATTGCCGCTGAGTTTTCATGACAGAGTAAACGATGAAATGGTGAGATGCTGTCACCAACTAATGGAGGAGTACGTGGTGGACACGTGTCCCGCATCCGTTAAAGCCAGAATAACCGAGCCGGCGCCGCCGTCCAGCCCCGTCGGCGTGCTCGACGCCGCCACCTGTGGGAGCTGCGACACACCTTCCGATAGGAATTTCGCTGGGCCGCCAAATAAACGGCTTCGATCCTCTGCTTCGGATGCACCGCAGCGGTAG 909 0.5424 MPSSSTMPLSPDPPFLCADEAAIAGLLDAEPHHMPEKDYLRRCRDRSVDVTARLDAVNWILKVHAYYEFSPVTAFLSVNYFDRFLSRCSLPQQSGGWAFQLLSVACLSLAAKMEESHVPFLLDLQLFEPKFVFEPKTIQRMELWVMSNLKWRLRSVTPFDYLHYFISKLPSSSSSQSLNHFFSTSSNLILSTTRVINFLGFAPSTVAAAAVLCSANGQLPLSFHDRVNDEMVRCCHQLMEEYVVDTCPASVKARITEPAPPSSPVGVLDAATCGSCDTPSDRNFAGPPNKRLRSSASDAPQR 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g02417 302 Gene3D - 26 222 - -
Gma10g02417 302 Gene3D - 36 154 - -
Gma10g02417 302 SMART Cyclin_C_2 156 264 IPR004367 -
Gma10g02417 302 MobiDBLite consensus disorder prediction 278 302 - -
Gma10g02417 302 Pfam Cyclin, N-terminal domain 28 153 IPR006671 -
Gma10g02417 302 ProSitePatterns Cyclins signature. 53 84 IPR006671 -
Gma10g02417 302 SMART cyclin_7 58 147 IPR013763 -
Gma10g02417 302 Pfam Cyclin, C-terminal domain 156 243 IPR004367 -
Gma10g02417 302 PANTHER CYCLINS 18 279 IPR039361 -
Gma10g02417 302 CDD CYCLIN 53 143 IPR013763 -
Gma10g02417 302 PANTHER CYCLIN-D2-1-LIKE 18 279 - -
Gma10g02417 302 SUPERFAMILY Cyclin-like 21 153 IPR036915 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g02417 Gma-Chr10 51778092 51779562 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g02417 22 246 Core Cell Cycle Gene Families AT1G70210 47.034 5.81e-65 206
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g02417 K18810 - gmx:100798996 609.372
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g02417 10 51778092 51779562 Gma20g01294 20 39635154 39636596 GST