Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g02399 ATGGCTGCCATTTCTTGCAAACTTTTCTTTCATTGTTGTTTATTTCTAAAATTCATATATGAAGCCAACGCTCAGTCAGCCGAATGCGATGACAGCATAGGGAACTACACAGCCAATAGCACTTATAACACCAACCTAAACACCCTTTTAACCACTCTCTCTTCCCACACAGAAATTAACTATGGTTTCTACAACTTTTCATATGGCCAAAACACTGACAAAGTAAACGCAATTGGGCTGTGTAGAGGAGATGTTGAGCCAGATGAGTGCCGCAGTTGCCTCAACGATGCCAGAGGCAATCTCACACAGCGTTGTCCAAACCAGAAAAAGGCAATTATATATTATGACAATTGCATGTTACGCTACTCCAACACCACAATTTTTGGCGTCATGGAAACTTCTCCTGCTCTTTTCCTGGGGAACACAGTCAATGCAACGGACGTGGAACAGTTTAATCAAGTGCTCCAAACCTTGATGAGCAATCTAACGGACAGAGCTGCATCAGGTGACTCTCGTCGTAAGTATGCTACAGACGATACAACTGCGGCAAGTTTTCAAAGAATATACGGTTTGGTGCAGTGCACACCTGATTTGTCTGGGCTAGACTGCAGTAGCTGCTTGGTTGGAGCTATAGAAAATATCCAAGATTGTTGTAGTGGTAAGAGAGGAGGTAGAGTTATTAGACCCAGTTGTAATGTGAGATTTGAACTCGGACCCTTCTACGGACAAACGACAACAATAGACCCAGTCCCAGAGGTATCACCACCTCCTCCTCCGCCCACCAATAACACTTCCCAACAAGaaagtagcaacacaacattgattgtcattgctgtaattgtgcctactgttgttgttttgctcatttgtctctgcctatatttaaggaggaTTAAAGGAGAAGAAGATGCAATTGAAGATGATGATGAAATTAAAATTGCTGAGTCATTACAATTCAACTTGGACACAATACGAGTTGCTACAGAAGACTTCTCTGAATCTAATAAACTAGGACAAGGTGGATTTGGAGCTGTTTATTGGggtaagctctctaatggacagatgattgcagtcaaaaggttgtcaagagattctgggcagggggatacggaatttaaaaatgaagtgcttttagtggccaagcttcagcaccgaaatttagttaggcttcttggtttctgcttggaaggaagagaaaggctactcgtctatgaatatgttcataataaaagccttgattatttcatattcgattcaaccatgaaagcacaactggattgggaaagacgctacaaaatcattagaggtattgctcgaggccttctctaccttcacgaagattctcgactgcgtattatccatcgtgatctcaaagcaagcaacattctcttagatgaagagatgaatcctaagatagcagattttggcatggcaagactggtattagtggatcaaactcaagcaaatacaagtagaattgtgggaacctatggatatatggcgccagagtatgcaatgcatggacaattttcagtgaaatcagatgtcttcagttttggtgtattagttcttgagattgtaagtggccagaaaaacagtggcattagtaatggggagaatatggaggatctactaagcttcgcatggagaaactggaaggaggggacagctataaatattCCTTTGTTTGTTCTTAGTGATTTGAGAGATGTTCCATTTCCTTCCTCCACACTCCACAGCCGTGGTTTTGAATGGAAATTCAGACTTTATGTTGCAGGTGTGAGGACAATTACAATGGCTGCTGTTTCTTTAAGGCTCCTTTGCTTTCTTTTTTTTCTCTGTTTCACAATAACATCACAAGCCGCGCAGACATGTGATAACGACACAGGGAACTACACAGTAAACAGCACGTATCACAACAACCTCAACACCCTCTTATCCAGTTTCTCTTCCCACAAAGAAATCAATTACGGTTTCTACAATTTCTCTCATGGCCAAGACCCAGACAGAGTATACGCCATTGGGCTCTGCAGAGGAGACCAAAAGCCTGATGATTGCCTCAAATGCCTCAACAATTCCAGAGTCTCTCTCGCAAAGGAGTGTCCAAACCAGAAACATGCGATTGATTGGGGTATAGAGTGCATGTTGCGCTACTCCAACCGCTCCATATTTAGCCTCATGGAAACTCAACCTATGGTGGAACTCGTGTACACGTTGGATGTAAAGGGTTCAGTGGAACAATTCAACGAGGCGCTGCAGAGCTTGATGAGGAATCTAACACGCACAGCTGCATCAGGTGACTCTCGTCTCAAGTATGCTACGGCTAGCACACCTGCTCCGAGTTTTCAAACCATATTTGGTTATACGCAGTGCACCCCTGATTTGTCATCGGAAGATTGCACCAAGTGCTTGGAAGAAGCTATTTCAAAAATTCCAGAGTGTTGTAGTGGCAAGGCTGGTGGCAATGTTTTAAAACCCAGTTGTAGAATTAGATTTGACCCCTACGTCTTCTATGGACCAACATTAAAATTAGACtcagatgcaccatcagtgtccaccaacaaaacttcttcttcaccagGAAAGAGCAACAACACATCAAGAACTATCATCGCCATAGCAGTGCCAGTTGCCAGTGTTGTTTTAGCGCTCAGTCTTTTCTGCATCTATCTAACAGTGAGGAAGCCAAGAAAAAAAACTGAAATTAAAAGAGAAGAAGAAGATAGTCATGAAGATGAAATTACAAGTTCTGAGTCATTGCAATTCAACTTTGACACCATTCGAGTTGCTACAAATGAATTCGACGATTCTAATAAACTTGGACAAGGCGGGTTTGGAGCTGTTTACAGAggtcggctttccaatggacaagtaattgctgtcaaaaggttgtcaagggattctgggcaaggaaatatggaattcaagaatgaagtgcttttactggtcaagcttcaacaccgaaatttagttagactacttgggttctgcgtggaagggagagaaaggctgcttgtctatgaatttgttcctaataagagccttgattacttcatatttgatccagtgaagaaaacacgattggattggcaaatgcgctacaaaatcattagaggtattgctcgaggaattctctacctccatgaggattctcgactgcgaattatacatagagaccttaaagcaagcaacattctcttggatgaagagatgcatcctaagatatcagattttgggatggcaagattggttcacttggatcaaacacaagcaaatacaaatagagttgttggaacctatggatatatggcacctgagtatgcaatacatggtcaattttcagcaaaatcagatgtttttagtttcggtgtattggttcttgagattgtaagtggcaaaagaaacagtggtaatcgtcgtggggagaacgtggaggatctattgagctttgcatggcgaaactggagaaatggaacaactgcaaatattgtagatcccacattaaacgacggttctcaagatgaaatgatgagatgcatccacattgggttattatgtgttcaaaaaaatgtggctgccagaccaaccatggcttctgttgtactcatgcttaatagttattctctcactctctcagtgccttcagaacctgcatttgttgtggatagtagaactagaagccttccagacacactatcatcagagtataattcaagggaaacaagatcaaataaatcaactgaatattcggtagatgaggcttcaattacggagccatatcctcgctag 3789 0.2349 MAAISCKLFFHCCLFLKFIYEANAQSAECDDSIGNYTANSTYNTNLNTLLTTLSSHTEINYGFYNFSYGQNTDKVNAIGLCRGDVEPDECRSCLNDARGNLTQRCPNQKKAIIYYDNCMLRYSNTTIFGVMETSPALFLGNTVNATDVEQFNQVLQTLMSNLTDRAASGDSRRKYATDDTTAASFQRIYGLVQCTPDLSGLDCSSCLVGAIENIQDCCSGKRGGRVIRPSCNVRFELGPFYGQTTTIDPVPEVSPPPPPPTNNTSQQESSNTTLIVIAVIVPTVVVLLICLCLYLRRIKGEEDAIEDDDEIKIAESLQFNLDTIRVATEDFSESNKLGQGGFGAVYWGKLSNGQMIAVKRLSRDSGQGDTEFKNEVLLVAKLQHRNLVRLLGFCLEGRERLLVYEYVHNKSLDYFIFDSTMKAQLDWERRYKIIRGIARGLLYLHEDSRLRIIHRDLKASNILLDEEMNPKIADFGMARLVLVDQTQANTSRIVGTYGYMAPEYAMHGQFSVKSDVFSFGVLVLEIVSGQKNSGISNGENMEDLLSFAWRNWKEGTAINIPLFVLSDLRDVPFPSSTLHSRGFEWKFRLYVAGVRTITMAAVSLRLLCFLFFLCFTITSQAAQTCDNDTGNYTVNSTYHNNLNTLLSSFSSHKEINYGFYNFSHGQDPDRVYAIGLCRGDQKPDDCLKCLNNSRVSLAKECPNQKHAIDWGIECMLRYSNRSIFSLMETQPMVELVYTLDVKGSVEQFNEALQSLMRNLTRTAASGDSRLKYATASTPAPSFQTIFGYTQCTPDLSSEDCTKCLEEAISKIPECCSGKAGGNVLKPSCRIRFDPYVFYGPTLKLDSDAPSVSTNKTSSSPGKSNNTSRTIIAIAVPVASVVLALSLFCIYLTVRKPRKKTEIKREEEDSHEDEITSSESLQFNFDTIRVATNEFDDSNKLGQGGFGAVYRGRLSNGQVIAVKRLSRDSGQGNMEFKNEVLLLVKLQHRNLVRLLGFCVEGRERLLVYEFVPNKSLDYFIFDPVKKTRLDWQMRYKIIRGIARGILYLHEDSRLRIIHRDLKASNILLDEEMHPKISDFGMARLVHLDQTQANTNRVVGTYGYMAPEYAIHGQFSAKSDVFSFGVLVLEIVSGKRNSGNRRGENVEDLLSFAWRNWRNGTTANIVDPTLNDGSQDEMMRCIHIGLLCVQKNVAARPTMASVVLMLNSYSLTLSVPSEPAFVVDSRTRSLPDTLSSEYNSRETRSNKSTEYSVDEASITEPYPR 1262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g02399 1262 Gene3D Phosphorylase Kinase; domain 1 298 406 - -
Gma10g02399 1262 Gene3D Phosphorylase Kinase; domain 1 895 1009 - -
Gma10g02399 1262 SUPERFAMILY Protein kinase-like (PK-like) 315 551 IPR011009 -
Gma10g02399 1262 MobiDBLite consensus disorder prediction 246 268 - -
Gma10g02399 1262 ProSitePatterns Protein kinases ATP-binding region signature. 337 359 IPR017441 GO:0005524
Gma10g02399 1262 ProSiteProfiles Gnk2-homologous domain profile. 133 240 IPR002902 -
Gma10g02399 1262 CDD STKc_IRAK 337 555 - -
Gma10g02399 1262 Gene3D Transferase(Phosphotransferase) domain 1 407 575 - -
Gma10g02399 1262 Gene3D Transferase(Phosphotransferase) domain 1 1010 1213 - -
Gma10g02399 1262 ProSitePatterns Protein kinases ATP-binding region signature. 940 962 IPR017441 GO:0005524
Gma10g02399 1262 MobiDBLite consensus disorder prediction 1226 1262 - -
Gma10g02399 1262 Pfam Protein tyrosine and serine/threonine kinase 334 532 IPR001245 GO:0004672|GO:0006468
Gma10g02399 1262 ProSitePatterns Serine/Threonine protein kinases active-site signature. 452 464 IPR008271 GO:0004672|GO:0006468
Gma10g02399 1262 ProSiteProfiles Protein kinase domain profile. 331 591 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma10g02399 1262 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1055 1067 IPR008271 GO:0004672|GO:0006468
Gma10g02399 1262 Pfam Salt stress response/antifungal 29 124 IPR002902 -
Gma10g02399 1262 Pfam Salt stress response/antifungal 625 720 IPR002902 -
Gma10g02399 1262 Pfam Salt stress response/antifungal 144 236 IPR002902 -
Gma10g02399 1262 Pfam Salt stress response/antifungal 746 833 IPR002902 -
Gma10g02399 1262 Gene3D - 618 722 IPR038408 -
Gma10g02399 1262 Gene3D - 136 240 IPR038408 -
Gma10g02399 1262 Gene3D - 23 126 IPR038408 -
Gma10g02399 1262 Gene3D - 736 837 IPR038408 -
Gma10g02399 1262 Pfam Protein kinase domain 935 1199 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma10g02399 1262 ProSiteProfiles Gnk2-homologous domain profile. 24 127 IPR002902 -
Gma10g02399 1262 CDD STKc_IRAK 940 1205 - -
Gma10g02399 1262 ProSiteProfiles Protein kinase domain profile. 934 1208 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma10g02399 1262 SMART serkin_6 934 1208 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma10g02399 1262 SMART serkin_6 331 563 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma10g02399 1262 MobiDBLite consensus disorder prediction 1226 1240 - -
Gma10g02399 1262 SUPERFAMILY Protein kinase-like (PK-like) 919 1233 IPR011009 -
Gma10g02399 1262 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 603 1249 - -
Gma10g02399 1262 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 7 560 - -
Gma10g02399 1262 ProSiteProfiles Gnk2-homologous domain profile. 729 837 IPR002902 -
Gma10g02399 1262 ProSiteProfiles Gnk2-homologous domain profile. 620 723 IPR002902 -
Gma10g02399 1262 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 603 1249 - -
Gma10g02399 1262 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 7 560 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g02399 Gma-Chr10 51583599 51594188 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g02399 29 560 Receptor kinase-like Gene Family AT4G38830 52.198 4.87e-177 536
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Gma10g02399 Pkinase 1.4e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g02399 - - gmx:100791582 1301.19