Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g02394 ATGGCCATGATTCCTTTGATGATGATGATACTGCTGTTGCTGTTTAAATTTCCTTCTGTCGTCCTTGCCACACTCAAATCTGATGAAGCCAACCTCGAGCTAGTATTCACATACCATAAATGTAACGAAGAGCTCGGAAACTTTACCACTGAGACCTACTCCAACAACCGGAATGTCCTTCTGTCCAATATGTATTCTGACAAAGAAATTGAGAATGGCTTCTACAATTCCTCATACGGCGAAGGCCCTGACAAAGTTTACGGTATCGGCTTCTGCAGAGGAGATGTTAAGCCAGATAAATGCCGTAGTTGCCTGGAAAAGTCCTCGACACTTCTCACCGATCGATGTCCAGTACAGAAAGAGGCGATTGGATGGTATGACCTATGCATGTTACGCTACTCCAACCGCTCAATAGTTGAGCAACCAGTTACTGATACTGACGACATCATCAAATGTAGCAACACTAACGCCACAAACAAAGATCGGTTTGATAAAGAGCTTGATGACTTGGTGGTGAGAATGAGAAGCAGGTCTGCAGAGGGTGACTCACGTCTCAAGTTTGCAGAGGGAGAGGCTCCGGTTCAATCAAGCAATGAAACCATACATGCTCTCCTTCAGTGCGTGCCTTATTTGTCTCACCAAAACTGTACTCGATGCTTGGAGTACGCTATGTCCAGGATTTCATATTGGTGTGATGGAAAAACAGGTGGTTGGTATCTAGGACGAAGCTGTTCTTTAAGATATGAGACCTACCTCTTCTTTGAGCTCATATTCCACGATGCACCAGCACCACAGCCTTCCCAACCTGCAGTTACCCCTACAAAAGATTTTCCGAAAAAGACCAACCCATCGCGAAATATCATTGTTATAGTCGTGCCAGTGTTCGCCGTTGCCATTGTCGTTGTGGGACTCATAGTTCTTATCTACAATTATTTTGGAGCGAGAAGACCAAGACACAAACCTATCCAAAgtgaaggtgatggtgaaggtgatggtgaaggtgaaggtgaGCTTGATAATGACATTAAAACAGATGAGTTAGCGCAATTTGAATTTGCTACCATCAAATTTGCAACAAATAACTTCTCTGATGCAAATAAGCTTGGTCAAGGTGGATTCGGAATTGTTTATAAGggtacgctctctgatggacaagaaattgcaattaaaagattgtctatcaattctaaccaaggagaaacagaatttaagactgaaatttcgctaacaggaaagcttcagcaccgaaacttagttagactacttggcttctgttttgcaaaaagagaaagattattgatatatgagttcgttcccaataaaagccttgattttttcatatttgatccaaacaaacgtgggaatttgaattgggaaagacgctacaatatcataagaggcatcgctcgcggtcttctttaccttcatgaagattctagattacaagttgttcatcgtgatctcaaaataagtaacattttgttggatgaagagttgaaccccaaaatatcagattttggcatggcaagattatttgagatcaatcaaactgaagccaatacaaatacagttgtcgggacctttggatatatggctcctgagtatattaaacatgggaagttttcagtcaaaagatctattaagctttgcatggaaaaactggaggggagggacagtttcaaatattgtagataccacactgaaggattattcttgggatga 1722 0.2758 MAMIPLMMMILLLLFKFPSVVLATLKSDEANLELVFTYHKCNEELGNFTTETYSNNRNVLLSNMYSDKEIENGFYNSSYGEGPDKVYGIGFCRGDVKPDKCRSCLEKSSTLLTDRCPVQKEAIGWYDLCMLRYSNRSIVEQPVTDTDDIIKCSNTNATNKDRFDKELDDLVVRMRSRSAEGDSRLKFAEGEAPVQSSNETIHALLQCVPYLSHQNCTRCLEYAMSRISYWCDGKTGGWYLGRSCSLRYETYLFFELIFHDAPAPQPSQPAVTPTKDFPKKTNPSRNIIVIVVPVFAVAIVVVGLIVLIYNYFGARRPRHKPIQSEGDGEGDGEGEGELDNDIKTDELAQFEFATIKFATNNFSDANKLGQGGFGIVYKGTLSDGQEIAIKRLSINSNQGETEFKTEISLTGKLQHRNLVRLLGFCFAKRERLLIYEFVPNKSLDFFIFDPNKRGNLNWERRYNIIRGIARGLLYLHEDSRLQVVHRDLKISNILLDEELNPKISDFGMARLFEINQTEANTNTVVGTFGYMAPEYIKHGKFSVKRSIKLCMEKLEGRDSFKYCRYHTEGLFLG 573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g02394 573 SUPERFAMILY Protein kinase-like (PK-like) 347 544 IPR011009 -
Gma10g02394 573 MobiDBLite consensus disorder prediction 320 339 - -
Gma10g02394 573 ProSiteProfiles Gnk2-homologous domain profile. 34 138 IPR002902 -
Gma10g02394 573 Pfam Protein kinase domain 363 543 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma10g02394 573 SMART serkin_6 362 572 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma10g02394 573 ProSiteProfiles Protein kinase domain profile. 362 573 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma10g02394 573 ProSitePatterns Serine/Threonine protein kinases active-site signature. 483 495 IPR008271 GO:0004672|GO:0006468
Gma10g02394 573 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 15 545 - -
Gma10g02394 573 Gene3D - 33 137 IPR038408 -
Gma10g02394 573 Gene3D - 148 253 IPR038408 -
Gma10g02394 573 Gene3D Phosphorylase Kinase; domain 1 333 437 - -
Gma10g02394 573 ProSitePatterns Protein kinases ATP-binding region signature. 368 390 IPR017441 GO:0005524
Gma10g02394 573 Pfam Salt stress response/antifungal 41 135 IPR002902 -
Gma10g02394 573 Pfam Salt stress response/antifungal 152 251 IPR002902 -
Gma10g02394 573 ProSiteProfiles Gnk2-homologous domain profile. 145 253 IPR002902 -
Gma10g02394 573 Gene3D Transferase(Phosphotransferase) domain 1 438 547 - -
Gma10g02394 573 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 15 545 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g02394 Gma-Chr10 51546330 51550565 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g02394 41 557 Receptor kinase-like Gene Family AT4G38830 44.466 1.05e-140 421
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Gma10g02394 Pkinase 2.4e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g02394 - - gmx:100789471 1048.88