Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g02393 ATGATTATCAGGTCCAAACTTAGTCTAACACTGTTCCTACTTTGCACCCTTTCACTCACCGTTACAGAAACCTCTGCATCAGTGTTCAACAACGTTAGCTGCTCGAGCAACAAGACTTTCACTCCGAACAGCACCTTCAACACCAACCTCAACACCCTCCTCTCTTACCTTTCCTCCAACGTAACCAACAACGTTAGATTCTTCAACGCCACCGCAGGTAAAGATTCGAACGCCGTCTATGGCCTCTACATGTGCCGTGGAGACGTGCCGTTTGCTCTATGCAGAGAGTGTGTGGGTTTTGCAACACTAACCATAGCCTCCTCATGTCCCACATCGAAAGAGGCTGTGATTTGGTACAACGAGTGTTTATTGCGCTACTCTTATAGGCTCATCTTCTCTAAAATGGAAGAGAGGCCAAGGCACAAGATCAATATTCCATTGGGGGACCCTCTGGTTTTGCATAGTAATGGATTCTACACTGCGTTAGGATCCATTTTCGATGAACTACCACATAAAGCAGCACTGGCTCTTGCCGAGTCTAATAATGGATATGCGGTTAAGCAAGAAAATACTTCTGCGAGTGTGACACTGTATGGCCTCGCGCAGTGCACGCCGGACTTGGCTGCCGGAGACTGCATACGGTGTGTCACCGATGCGGCGGCGGAGTTTGTCAAGTCTTGCTGCGGAGGGAGCATAGGAGCGAGTGTTCTGTTTCCGAGTTGCATTGTAAGGTATGAGACGTATCCGTTTTATCAGCATTCGGGAACCTCCGCGCCAACAATGATTAagcGTGGAGGAAATATTGGAACTGAAGTGATTGTGATCGTTGTTGTCTTGGTTGTCGTTTTGGTGATGCTTTTTGGCTTTGGCTATTGTTTCATCCGGATAAAAGCGAGAAAGAAACGGAAGGCCGGTGACAGAGAAAAATttgggccagaacacactgtcttggagtctttggaatttgatttggttacaattgaagcagccacaaacaatttttctgaagaccgcaggattggcaaagggggttacggagaagtgtacaagggaatccttcctaaccgagaggaagtagctgtaaagagattatcaacaaattctaagcaaggagcggaggaattcaaaaatgaagtgttgttaatagcaaaacttcaacacaaaaatttggtgagattagtaggattttgccaagaagacagagaaaaaatacttatttacgaatatgtgcctaacaagagccttgaccacttcttatttgattcccaaaagcacagacaattaacttggtcggagcggtttaaaatcataaaaggaattgcaagaggtattctttatcttcatgaagattctcgtcttaagattatacaccgtgatatcaaaccaagcaatgttctattggacaatggcatcaatccaaaaatctctgattttggaatggcaaggatggtagctacagaccaaattcaaggatgtacgaatagagttgtgggcacatatggttatatgtctcctgaatatgcaatgcatggacaattttctgagaagtctgatgtattcagttttggagttatggttcttgagattattagtgggaagaagaactcttgttattttgaatcatgccgtgttgatgacctcttgagttatgcatggaataactggagggatgaatcatcatttcaattactggatccaactctgctagagtcttatgttccaaacgaagttgaaaagtATGAGGCAGCGAATTCTTCGAACGGTGCTAAGTTATACGCCACAAAGCAAGCTAAGATCTCTGGGTTTCAGACCCTCTATTGTATGACTCAGTGTACACCGGATTTGTCACCCCAAGATTGCAGAAGAATGGATTCCCCGGCACCTGAAGGAATTATTAGTCCAACACATTCTACAATGGATAAAGggaaaagcagtatctctataattttggcgatcgttgtcccaattacagttgcaattctacttttcattgttggcgtctacttcctacgtaagagggcaagcaagaagtataatactttcgtccaggattcaattgcagatgatcttacagatgtcggtgatgtggagtccttgcaattcgacttgcctacagttgaagctgccacaaacagattctcggatgagaacaagattggccaaggtggatttggggtggtttataagggtgtcctccctagcggacaggagatagctgtgaagaggttgtcagtaacctccttgcagggtgctgtagagttcaggaatgaagctgctcttgtggccaagcttcaacatagaaatttagtgagactattgggattttgcttggagggacaagagaagatccttatctatgaatacataccaaacaaaagtcttgattactttttatttgaccctgcaaagcaaaaagagttagattggtcaagacgctacaaaattatagttggtattgctcgaggaattcagtatttacatgaagattcccaacttagaattatacaccgggatgtcaaagctagtaatgttctattagatgaaaatatgaacccaaagatttcagattttggtatggcaaaaattttccaggcagatcagactcaagtaaatacaggaaggatagttgggacttatggttacatgtctccagaatatgcaatgcgtggacagttctctgtgaaatcagatgtgttcagctttggtgtcttagttttggagattgtgagtggcaagaagaacactgacttttatcaatcgaatcatgctgatgaccttttaagccatgcgtggaagaattggacactgcagacacctctggagttgctggatccaacactgagagatgcatgtcgtagttgcttaaatgactcaagagtccttctcacacaacgttgtccaaaccagaaagaggccattgggtggacaagtggcagaattggaaaaccaagctgcaatcttaggttTGATACATCCCCTTTCTATGACTCTGCAGCTGATGCCTCTCCTCCGTTGTCGCCACCACAAGCGCCTTCTCCTCCTCCTCCTTCAGATACCAATACTGCTCCCTCTGAAGgaaagagcaacacaacacaaattgttgttgcggtagttgtgccaactgttgtcatccttgtgctggtcatctccgtttgcattttcctaagagcaaggaagcaaaggaaaaatgttgACAATGACAatgaaattgacgatgaaattgaacctactgagacactgcaattcaactttgacatcataagaatggctacaaataacttttctgagacaaatatgctaggaagaggaggattcggacctgtttacaagggtaagctttccaggggacaagaagttgctgtcaaaagattgtctatgaattcaggacaaggagatgtagaatttaaaaatgaagtgcagttagtggccaagcttcaacaccgaaatttagtcagactacttggttttagtttggaaagaaaagaaaggttactggtctacgagtttgttcccaataaaagccttgattacttcatatttgatccaattaagcgtgcacatttagactgggaaaggcggtataaaatcataggcggcattgccaaaggccttctttatcttcatgaggattcgagactgaggattattcatcgtgatcttaaagcaagcaacattctcttggatgctgaaatgaatcctaagatatcggattttggtatggcaagattgtttcttgtggatcaaactcaaggaaacacaagtaaaattgttggaacttatggatatatggcacccgaatatataagtcaaggacaattctctgtgaagtcagacgttttcagttttggtgtactggttttagagatagtaagtggccagaaaaatagtggatttcaacatggagaccatgtagaggatctaataagctttgcctggaaaaactggagggagggaacagcatcaaatctcatagacccgacattgaatacagATGTTGAAGAGTTCAATCGAGTGCTTAGGAACTTGCTAGATAGCCTTATAGGCCAAATGATTCAGTACCAGGCTGACTTGTCAGAACAAGATTGCAGTGCATGCTTGGTTGATGCTATAAAAGGAATTCCTTAA 4125 0.1549 MIIRSKLSLTLFLLCTLSLTVTETSASVFNNVSCSSNKTFTPNSTFNTNLNTLLSYLSSNVTNNVRFFNATAGKDSNAVYGLYMCRGDVPFALCRECVGFATLTIASSCPTSKEAVIWYNECLLRYSYRLIFSKMEERPRHKINIPLGDPLVLHSNGFYTALGSIFDELPHKAALALAESNNGYAVKQENTSASVTLYGLAQCTPDLAAGDCIRCVTDAAAEFVKSCCGGSIGASVLFPSCIVRYETYPFYQHSGTSAPTMIKRGGNIGTEVIVIVVVLVVVLVMLFGFGYCFIRIKARKKRKAGDREKFGPEHTVLESLEFDLVTIEAATNNFSEDRRIGKGGYGEVYKGILPNREEVAVKRLSTNSKQGAEEFKNEVLLIAKLQHKNLVRLVGFCQEDREKILIYEYVPNKSLDHFLFDSQKHRQLTWSERFKIIKGIARGILYLHEDSRLKIIHRDIKPSNVLLDNGINPKISDFGMARMVATDQIQGCTNRVVGTYGYMSPEYAMHGQFSEKSDVFSFGVMVLEIISGKKNSCYFESCRVDDLLSYAWNNWRDESSFQLLDPTLLESYVPNEVEKYEAANSSNGAKLYATKQAKISGFQTLYCMTQCTPDLSPQDCRRMDSPAPEGIISPTHSTMDKGKSSISIILAIVVPITVAILLFIVGVYFLRKRASKKYNTFVQDSIADDLTDVGDVESLQFDLPTVEAATNRFSDENKIGQGGFGVVYKGVLPSGQEIAVKRLSVTSLQGAVEFRNEAALVAKLQHRNLVRLLGFCLEGQEKILIYEYIPNKSLDYFLFDPAKQKELDWSRRYKIIVGIARGIQYLHEDSQLRIIHRDVKASNVLLDENMNPKISDFGMAKIFQADQTQVNTGRIVGTYGYMSPEYAMRGQFSVKSDVFSFGVLVLEIVSGKKNTDFYQSNHADDLLSHAWKNWTLQTPLELLDPTLRDACRSCLNDSRVLLTQRCPNQKEAIGWTSGRIGKPSCNLRFDTSPFYDSAADASPPLSPPQAPSPPPPSDTNTAPSEGKSNTTQIVVAVVVPTVVILVLVISVCIFLRARKQRKNVDNDNEIDDEIEPTETLQFNFDIIRMATNNFSETNMLGRGGFGPVYKGKLSRGQEVAVKRLSMNSGQGDVEFKNEVQLVAKLQHRNLVRLLGFSLERKERLLVYEFVPNKSLDYFIFDPIKRAHLDWERRYKIIGGIAKGLLYLHEDSRLRIIHRDLKASNILLDAEMNPKISDFGMARLFLVDQTQGNTSKIVGTYGYMAPEYISQGQFSVKSDVFSFGVLVLEIVSGQKNSGFQHGDHVEDLISFAWKNWREGTASNLIDPTLNTDVEEFNRVLRNLLDSLIGQMIQYQADLSEQDCSACLVDAIKGIP 1374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g02393 1374 Gene3D Phosphorylase Kinase; domain 1 1069 1169 - -
Gma10g02393 1374 SUPERFAMILY Protein kinase-like (PK-like) 701 956 IPR011009 -
Gma10g02393 1374 ProSitePatterns Protein kinases ATP-binding region signature. 340 362 IPR017441 GO:0005524
Gma10g02393 1374 ProSiteProfiles Gnk2-homologous domain profile. 882 994 IPR002902 -
Gma10g02393 1374 ProSiteProfiles Protein kinase domain profile. 713 995 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma10g02393 1374 Pfam Protein kinase domain 1095 1303 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma10g02393 1374 Pfam Protein kinase domain 335 534 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma10g02393 1374 SUPERFAMILY Protein kinase-like (PK-like) 315 578 IPR011009 -
Gma10g02393 1374 MobiDBLite consensus disorder prediction 998 1027 - -
Gma10g02393 1374 Gene3D Transferase(Phosphotransferase) domain 1 410 594 - -
Gma10g02393 1374 Gene3D Transferase(Phosphotransferase) domain 1 1170 1357 - -
Gma10g02393 1374 Gene3D Transferase(Phosphotransferase) domain 1 789 972 - -
Gma10g02393 1374 Pfam Protein tyrosine and serine/threonine kinase 716 955 IPR001245 GO:0004672|GO:0006468
Gma10g02393 1374 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 8 579 - -
Gma10g02393 1374 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 8 579 - -
Gma10g02393 1374 ProSiteProfiles Gnk2-homologous domain profile. 28 131 IPR002902 -
Gma10g02393 1374 Pfam Salt stress response/antifungal 157 248 IPR002902 -
Gma10g02393 1374 Pfam Salt stress response/antifungal 34 127 IPR002902 -
Gma10g02393 1374 ProSiteProfiles Protein kinase domain profile. 334 706 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma10g02393 1374 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 640 1000 - -
Gma10g02393 1374 ProSitePatterns Serine/Threonine protein kinases active-site signature. 834 846 IPR008271 GO:0004672|GO:0006468
Gma10g02393 1374 ProSiteProfiles Protein kinase domain profile. 1094 1347 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma10g02393 1374 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 1017 1331 - -
Gma10g02393 1374 CDD STKc_IRAK 1100 1344 - -
Gma10g02393 1374 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1215 1227 IPR008271 GO:0004672|GO:0006468
Gma10g02393 1374 ProSitePatterns Serine/Threonine protein kinases active-site signature. 455 467 IPR008271 GO:0004672|GO:0006468
Gma10g02393 1374 Gene3D - 152 250 IPR038408 -
Gma10g02393 1374 Gene3D - 27 129 IPR038408 -
Gma10g02393 1374 ProSitePatterns Protein kinases ATP-binding region signature. 719 741 IPR017441 GO:0005524
Gma10g02393 1374 CDD STKc_IRAK 719 950 - -
Gma10g02393 1374 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 640 1000 - -
Gma10g02393 1374 SMART serkin_6 334 628 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma10g02393 1374 SMART serkin_6 1094 1366 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma10g02393 1374 SMART serkin_6 713 947 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma10g02393 1374 Gene3D Phosphorylase Kinase; domain 1 676 788 - -
Gma10g02393 1374 Gene3D Phosphorylase Kinase; domain 1 295 409 - -
Gma10g02393 1374 ProSiteProfiles Gnk2-homologous domain profile. 140 250 IPR002902 -
Gma10g02393 1374 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 1017 1331 - -
Gma10g02393 1374 SUPERFAMILY Protein kinase-like (PK-like) 1074 1330 IPR011009 -
Gma10g02393 1374 MobiDBLite consensus disorder prediction 1004 1020 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g02393 Gma-Chr10 51516892 51542999 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g02393 582 948 Receptor kinase-like Gene Family AT4G05200 49.758 1.07e-128 412
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Gma10g02393 Pkinase 1.8e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g02393 - - gmx:100305409 1062.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g02393 10 51516892 51542999 Gma20g01317 20 40162923 40170633 GST