Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g02392 ATGGGTTCTTTTCATTTGTTCCTTCTGCTCCCAACTTTCTTTTCCCTCTTTCTTCACACCTCTCCCTCCCCTATCATCCAAGCAGCTATCGATCAAGGTACCAAAGCCTACTATAACTGCACAAGAAACAGCACTTTTGCTTCCTATAGCGCTTATCGTTCTAATGTCAAAATACTCCTAGATTTTCTCTCCTCCAATGGCACCAACAATGCCAAATTCTACAACACTACAGTTTATAGTGAAGACACTGCAGACCCTGTTCATGGTAGCTTCCTTTGTACAAGAGACACCATTCCAAAACAGTGTCAAGAATGTGTGACACAAGCTGCCAAACTCATATCATCGCTTTGCAACAATGCTACAGAAGCTATAGTATGGTACCAAGTATGCTATGTGCGCTACTCCGATCGTCGTTTCTTCTCCACGGTGGAGGAGAGTCCTAAACTCTCCTTTATGAATGATCAGGATTATGTGGGTAACGTTGGGCGCTTCAACAACATTGTGTGGGATATGATGAATGATTTGAGAAGTGAGGCAGCAAGTGCTTCTAACAAATCGGCTGATAAGTCCGTGAACATCACAGATAATCAAAAGGCATATGGCTACGTTAGGTGCCTCCCATACCTGTCCGGTGAGAACTGTAGCTGGTGTCTTAGTGATGCCATAGCAGAAATTCCAACAGGTTGCTGCAGAGGAAAATCTgggggaacaataatatatcccagttgtggtgttagatacgaattatatcAATTCCATAAGGCACATATCAGGGGTGGTTCGGTGTCGCCGCCGCCACTTCCCAATAGTTCTTCTTCCCCATTTTCTTCATCAGggaaaagaaaaaagaagacactaacaataattgtgattgtagttccaattgttgtttcactggtgcttctagcgttgagatgctgctgctttttacgtagaaaagaaacaaagaatcaacatgatattctcaaagaaagctttgggaatgacagtaccactctggaaactttgcgatttgaattagccaaaattgaagctgcaacaaatagatttgctaaagaaaacatgataggcaaaggtggatttggcgaggtttataggggtattctttcagatggaaaagaaatagcagtgaagaggctcactggaagctccaggcaaggagcagtggagtttagaaatgaggttcaggttatagcaaaacttcaacacagaaatttagtgagattacaaggattttgcttagaagatgacgaaaagatacttatttatgagtatgtgccaaacaagagccttgattattttttattggataccaagaagcgaagactactatcttggcagaattgtagggacataagattattaatggaaaaaggaaaggttgttcttctgtatcggatggtattgatgacatccggagacatgcttggacgaaatggacagagcaaacgccattggaactattggattctaacatag 1479 0.236 MGSFHLFLLLPTFFSLFLHTSPSPIIQAAIDQGTKAYYNCTRNSTFASYSAYRSNVKILLDFLSSNGTNNAKFYNTTVYSEDTADPVHGSFLCTRDTIPKQCQECVTQAAKLISSLCNNATEAIVWYQVCYVRYSDRRFFSTVEESPKLSFMNDQDYVGNVGRFNNIVWDMMNDLRSEAASASNKSADKSVNITDNQKAYGYVRCLPYLSGENCSWCLSDAIAEIPTGCCRGKSGGTIIYPSCGVRYELYQFHKAHIRGGSVSPPPLPNSSSSPFSSSGKRKKKTLTIIVIVVPIVVSLVLLALRCCCFLRRKETKNQHDILKESFGNDSTTLETLRFELAKIEAATNRFAKENMIGKGGFGEVYRGILSDGKEIAVKRLTGSSRQGAVEFRNEVQVIAKLQHRNLVRLQGFCLEDDEKILIYEYVPNKSLDYFLLDTKKRRLLSWQNCRDIRLLMEKGKVVLLYRMVLMTSGDMLGRNGQSKRHWNYWILT 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g02392 492 Gene3D Phosphorylase Kinase; domain 1 311 425 - -
Gma10g02392 492 ProSitePatterns Protein kinases ATP-binding region signature. 356 378 IPR017441 GO:0005524
Gma10g02392 492 Pfam Protein tyrosine and serine/threonine kinase 353 443 IPR001245 GO:0004672|GO:0006468
Gma10g02392 492 ProSiteProfiles Gnk2-homologous domain profile. 145 252 IPR002902 -
Gma10g02392 492 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 10 454 - -
Gma10g02392 492 SUPERFAMILY Protein kinase-like (PK-like) 333 452 IPR011009 -
Gma10g02392 492 Gene3D - 33 139 IPR038408 -
Gma10g02392 492 Gene3D - 148 252 IPR038408 -
Gma10g02392 492 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 10 454 - -
Gma10g02392 492 Pfam Salt stress response/antifungal 40 136 IPR002902 -
Gma10g02392 492 Pfam Salt stress response/antifungal 160 250 IPR002902 -
Gma10g02392 492 SMART tyrkin_6 350 491 IPR020635 GO:0004713|GO:0006468
Gma10g02392 492 ProSiteProfiles Protein kinase domain profile. 350 492 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma10g02392 492 ProSiteProfiles Gnk2-homologous domain profile. 34 139 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g02392 Gma-Chr10 51510473 51513373 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g02392 12 466 Receptor kinase-like Gene Family AT4G05200 37.975 3.49e-99 311
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Gma10g02392 PK_Tyr_Ser-Thr 5.1e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g02392 - - gmx:100793219 738.028