Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g02378 ATGCAACTTTGTCAGAGCAAGATGCCAGCAAGGGATGGGGTATTAGAGATGGGGCGAGCAAGGAGTCTCACGATCCCTCCTGTTGATAACATTCGAAATACTGATATAAACCCATATCTGGTTCGACCTACATCTTTTGAAATAAGGCCTTCTACAAATTTGAATGTCACTCGACCTCCTACCTTAAATCCAATAACTCCATTGCAAAAACGTGTTAGGAATCAGTTTGAAGCTACACATACTAGTGACCCTATTGTGAACCATGTAAATAAATCTTCGTTTATGCCAGAACAGTCATTTGACCGTATTGAGAACAAGGATGCAAGTATTTCTAAGATACATCAGTTGCCTAATCAGCATCCCGGACTAATTTCATCCAACCAGCAAAATCACGGGCAAGCACCACAGCTGCAGTTTTTTCCATCTCAGGATCCAACGCCCTCTCAATTTAGTCCTGGGAGTTCATTGCAGCTACATGATGCTTCTATTAGTACAGCCATGTCAAATCCGTTACATGGTATACAATTCCCTTCACCAGTCCAAAGCTTTGCAAATAACCCTTTCATTAGATATACTAGTTTAATTAGTTCTCTAATGTCTCAAGGCGTGATCTCATTGGCTAACCAGCTGCCTGCACAGGATTCTATTGGAACTGAGTTTAATCCAGATATTCTGAAGGTTCGTCACGAGTCTCCAGCGAACGCCTTGTATCGTGATCTCCCTAGACAATGCAAAACTTGTGGGCTCCGATTCAGATGCCAAGAGAAACACAGTAGTCATATGGATTGGCATGTGACTAAGAATCGGATGTCTAAAAGCTGTAAGCAGAAGCCCTCTCGCAAGTGGTTTGCGAGTCTTAAGCTGTGGCTTAGTGGTGCAGAGGCATTGGGAACAGAATCAGTTCCACATTTTTTGGCAACagaaagcatagattatgaagaaaggaaagatcatgaagaGTTTGCAGTGCCAACAGAAGAGGACCAGAGTACATGTGCGTTATGTGGAGAGTCTTTTGATGAGTTTTACAGTGATGAAATGGAGGAATGGATGTATAGAGGAGCTGCATACCTCAATGCACCCGCTAGAAAAACATCAGCAGGCATGGATAGGTCACAGTTAGGCCCCATAATTCATGCTAAATGCAGATCAGACTCTAATCTGCAGTGTGCCAATGAAGAGGATACTCGAAGGAAACGAATGCGGAGTTGA 1212 0.4191 MQLCQSKMPARDGVLEMGRARSLTIPPVDNIRNTDINPYLVRPTSFEIRPSTNLNVTRPPTLNPITPLQKRVRNQFEATHTSDPIVNHVNKSSFMPEQSFDRIENKDASISKIHQLPNQHPGLISSNQQNHGQAPQLQFFPSQDPTPSQFSPGSSLQLHDASISTAMSNPLHGIQFPSPVQSFANNPFIRYTSLISSLMSQGVISLANQLPAQDSIGTEFNPDILKVRHESPANALYRDLPRQCKTCGLRFRCQEKHSSHMDWHVTKNRMSKSCKQKPSRKWFASLKLWLSGAEALGTESVPHFLATESIDYEERKDHEEFAVPTEEDQSTCALCGESFDEFYSDEMEEWMYRGAAYLNAPARKTSAGMDRSQLGPIIHAKCRSDSNLQCANEEDTRRKRMRS 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g02378 403 PANTHER POLYADENYLATION AND CLEAVAGE FACTOR HOMOLOG 4 121 387 - -
Gma10g02378 403 PANTHER PRE-MRNA CLEAVAGE COMPLEX II 121 387 IPR045154 GO:0000993|GO:0003729|GO:0006369|GO:0006378|GO:0006379
Gma10g02378 403 ProSitePatterns Zinc finger C2H2 type domain signature. 244 264 IPR013087 -
Gma10g02378 403 MobiDBLite consensus disorder prediction 117 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g02378 Gma-Chr10 51389175 51390772 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g02378 187 403 C2H2 Transcription Factor Family AT4G04885 63.134 6.42e-92 292
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g02378 10 51389175 51390772 Gma20g01336 20 40326644 40327981 GST