Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g02342 ATGCCCAGTCTGTTCTCCAAACACCTCCACCTCTGTTTCTTCAAGCCCAAATATCCCACCATTCTCTGCCAACACAGCCACCACACCCCTCCACCTTCTTCTGCCGACAACTCCGACGCCACCTCATCCACCTCCACAGAACCAGACTTCGCCTCCATCTTCGCTTCGCAGCGCTTCTTCTTCTCCTCCCCGGGCACCTCCAACTCCATCGTCGAGTCCCCCGACACGCGCACCTTCGTCGTCCCCACCGGTGGCGGTGTCGGAGTCCCCAAGTACTCCCTCAACCCCTACGTCGATTTTCTCCGCTCAATGCAAGAAATGATACGTTCGCGCCAAGTCTTGGACATCACTAAAGACTCCGAATATCTCCACGAACTTCTCCTTTGCTACCTCGCTCTCAACCCCACGCACACTCACAAACATATCCTTCGCGCTTTCACCGACCTCGTCCTCGAACTCTTGTCCTCCACGACCCCGTGCCGGACGACACACAACCACAACAGCCACCGACGCCACCGTAGTCTCTCTGGAAGGTTGCTGTAA 543 0.5672 MPSLFSKHLHLCFFKPKYPTILCQHSHHTPPPSSADNSDATSSTSTEPDFASIFASQRFFFSSPGTSNSIVESPDTRTFVVPTGGGVGVPKYSLNPYVDFLRSMQEMIRSRQVLDITKDSEYLHELLLCYLALNPTHTHKHILRAFTDLVLELLSSTTPCRTTHNHNSHRRHRSLSGRLL 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g02342 180 MobiDBLite consensus disorder prediction 26 47 - -
Gma10g02342 180 MobiDBLite consensus disorder prediction 164 180 - -
Gma10g02342 180 ProSiteProfiles OVATE domain profile. 89 152 IPR006458 -
Gma10g02342 180 MobiDBLite consensus disorder prediction 160 180 - -
Gma10g02342 180 Pfam Transcriptional repressor, ovate 93 153 IPR006458 -
Gma10g02342 180 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 89 155 IPR006458 -
Gma10g02342 180 MobiDBLite consensus disorder prediction 25 47 - -
Gma10g02342 180 PANTHER TRANSCRIPTION REPRESSOR OFP12 33 161 - -
Gma10g02342 180 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 33 161 IPR038933 GO:0045892
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g02342 Gma-Chr10 51043787 51044755 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Gma10g02342 Ovate 2.4e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g02342 - - gmx:102667886 301.212