Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g02328 ATGTTCTCTTCCACATATGACTCCAACTTTTTCCCTAACTTCCCTTTGTCTACTTACCCAATCCTTCCTTTTCTCATTGAATCTGAAAATGATTTTGCAAGCCACACTCTTCTGGTTGAGGACCCTCTTGTTGTTCCCCTCACACATGATCCTCCTCCATTCCCTGAAGAAACCGTTGCCAATTTTGCAGTTGCTGATCATCACTGCACTGCCATGCTTGATAATCAACACGATGCAGCAGCAAACACTAACTATGGTTCCCACTATGGTAGCAGCATTTCCAATTTCCTCACCCATCAGAAACCTGCAGCAGCCACAGCCAAAAAAGACAGGCACAGTAAGATTCACACATCTCAGGGTTTGAGGGACCGGAGGGTGAGATTATCAAGCGAAATAGCCCGGAAGTTCTTTGATCTTCAGGACATGTTAGAGTTTGACAAACCAAGTAACACCCTTGAGTGGCTCTTCACAAAGTCTGAGAATGCAATCAAAGAACTAGCCCGAAGTAAGCATAGCGGTAGTGTTAGTACTGGGGGTGACAAGTCTTCACGCGACCCTTCTGGGGATTCAAATAACAACTTCAACAACAACAAATCAATGGTGGGTGGTGGTGTTGGTGATGGTTCTAAAGGGAGGAAGCTGAAATGGGCACAGAGGGGTGATGCTTGTATTCAGAACAAAAAAGAGTCAAGGGAAAGGGCAAGGGCAAGGGCAAGAGAAAGGACTTGTTTCAAGAAGTGTAGCAGTATAAGGGTGCAGCAGCAGAAAGACTTTGATGAAAGGTGCCCTGCAACAACAAACACTACTCAAATGCTGCACCAATTGTGGTCTTCCATTCAGCCTGAACCTGAAGAACCTCGTGCAAGATGGGTTCAGCCTTATTATAACCCTTATTTCGTTGATGATAATGAAGCTCCAAGAGATCATGGCTTTAACGTCATTGAAGAATCTATTATGATAAAAAGGAACATGAAGCCGTTATCTCAACCAAACCTTGTGATCCCTAGGGAAGCAAGTTTCAACAACAATGAGTTCCCCCTATTACCCTATTCCACTACTCCAAACTGGGAGAGTACTAATGGGGCCGTTAACTATTGTGGAATAAGCACCATGAATCTATCTACGTGTTTCATGAACCCGTGGTAA 1146 0.4424 MFSSTYDSNFFPNFPLSTYPILPFLIESENDFASHTLLVEDPLVVPLTHDPPPFPEETVANFAVADHHCTAMLDNQHDAAANTNYGSHYGSSISNFLTHQKPAAATAKKDRHSKIHTSQGLRDRRVRLSSEIARKFFDLQDMLEFDKPSNTLEWLFTKSENAIKELARSKHSGSVSTGGDKSSRDPSGDSNNNFNNNKSMVGGGVGDGSKGRKLKWAQRGDACIQNKKESRERARARARERTCFKKCSSIRVQQQKDFDERCPATTNTTQMLHQLWSSIQPEPEEPRARWVQPYYNPYFVDDNEAPRDHGFNVIEESIMIKRNMKPLSQPNLVIPREASFNNNEFPLLPYSTTPNWESTNGAVNYCGISTMNLSTCFMNPW 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g02328 381 MobiDBLite consensus disorder prediction 212 230 - -
Gma10g02328 381 ProSiteProfiles R domain profile. 228 245 IPR017888 -
Gma10g02328 381 MobiDBLite consensus disorder prediction 170 202 - -
Gma10g02328 381 ProSiteProfiles TCP domain profile. 108 166 IPR017887 -
Gma10g02328 381 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 18 376 IPR005333 GO:0003700
Gma10g02328 381 Pfam TCP family transcription factor 106 247 IPR017887 -
Gma10g02328 381 PANTHER TRANSCRIPTION FACTOR TCP FAMILY-RELATED 18 376 - -
Gma10g02328 381 MobiDBLite consensus disorder prediction 167 230 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g02328 Gma-Chr10 50908926 50910071 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g02328 101 242 TCP Transcription Factor Family AT1G67260 43.590 6.00e-24 99.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Gma10g02328 TCP 1.5e-42 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g02328 - - gmx:100777204 754.207
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g02328 10 50908926 50910071 Gma20g01386 20 40930257 40931384 GST