Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g02324 ATGGGGAAGAAGAAGGATAAAATCGTTCTTCCACCGGAGCTTCCGCCGGAGATTCCTGACGACGAAGTTGAAGTTTCCGACGATGACCTCCAATTCGTCAAGGAGAACCGCGCCTATGCCTCCTTGCTTTCCACCTTGGACACCCATTCAATCACCAAGCATGTTTCACGGGTTGCTGATGCCAAAGATGATGCATTGGAGAAACTTTATGAGAAACGCATGCAAAAGAATGCTCTCAAGAAAGAAAAAGAAGAAACTGGTTTGCAGGTTGATCGTGTAGATGCTCTTCCAATCAAGACATTGGATGGAAAAATCCATTACCGGACAGCTACAAAGACAGTATCAGAAAATGATCCAAGTGAAGAGGGAACTGGAGAGGATGTCAATAAAGACAAAGGTATGGTCAAGCTAACTAAGGCTGAAAAGAGAGCCAAGCTTAAGAAAATGAGAAAAGAGGCGAAACAACAAGGGAAAGAGGTGGCTAAAGCAGAAGTGGAAGAGACACCACAAGCAGCAGTGCTGGCTGAGGTAAAGGAAGATCTTACAGTTGAGGAGGCATTTGAAAGTAAGAAGCATAAACTTGCAGAATTGGGGAATGCCTTGCTTACAGATCCAGAGTCCAATATTAAATTTCTGAAGGAGATGGTGCAGATATCTAAAGATAATGATGATACCATTGTTAAACTTGGACTTCTTTCCCTCTTGGCTGTTTTCAAAGATATTGTCCCTGGCTATCGGATCAGGCTTCCTACTGAAAAGGAACTAGAAATGAAGGTTTCAAAGACTGTTAGAAAGATGCGTTATTATGAGTCAACTCTTCTCTCTGCATACAAGGCATACTTGCAAAGGCTAGTAGTCTTAGAAAAGAAGCCTTTATTTCAGCATGTAGCAGTTCGTTGTATTTGTTCTTTGCTTGATGCAAATCCCCATTTCAACTTTCGCGAAAGTTTGTTGGATGCTACTGTCGGAAACATAAGCTCTGCTAATGAGGCTATAAGGAAACTTTGTTGTTCCACAATTAAGTCACTCTTTGAGAATGAGGGTAAACATGGGGGTGAAGTTACTGTGGAGGCTGTTCGATTGATTGCCAATCATGTTAAAGCTCATAATTGTCAAATGCACCCAGATTCTGTTGGTGTTTTCTTGTCTCTTTCATTTGATGAGGATCTTGTGATGGCTAAAAGGATAGAAGATGAACAGAAATTTAAAAACAACAAAAGTAAGAAAAGGAAAAACTTGGAGGCATCAAATCAGTTAGAGAATGAGAGAAAGAAAAGTAGAAAAGAAATGATCTCCAAGACAAGAGAGGAGGTTGAAGCTGATTACAAGGCTGCATCCTTAGCCCCGGATGTTATGGAGAAGAAACATATGCAAACTGAAACACTCTCTGCTGTCTTTGAGACATACTTTCGCATTTTGAAGCATACTATGCAGTCCATAAGGGCCAGGCCTGAAGCAAACACTGGGGCATTATCTTCTGCAGTGGAACTCCTCCCTTTGCTTGCTCCATGTCTGAAAGGACTGGCAAAATTTTCACATCTGATTGACCTTGATTTCATGGGTGATCTAATGAACCATCTGAGAGTACTTGCTTCTGGAAGTAGCAACTCAGGCAACACTTCTGACAAGTGTTCTAAATGTTTGACCGTATCGGAACGTCTCCAGTGTTGCATTGTTGCTTTTAAAGTGATGAGGAACAATCTTGATGCCTTGAATGTTGATTTACAGGACTTCTTTCTCCATCTTTACAATCTTGTACTTGAATACAGGCCAGGAAGAGATCAAGGAGAGGTGTTAGCAGAAGCTTTGAAGATAATGTTGTGTGATGATAAGCAACACGACATGCAGAAGACTGCTGCATTTATAAAACGATTAGCAACGCTTTCACTGTGTGTTGGATCAGCAGATTCCATGGCTGCCTTGGTCACAGTAAAGCATCTTCTTCAGAAGAATGTTAAGTGCAGAAATTTATTGGAAAATGACATTGGAGGGGGCTCTGTTTCGGGCACAATTCATAAATATCTACCATATTCCACAGATCCCAATTTAAGTGGTGCCCTTGCCTCAGTACTTTGGGAACTCAATCTTTTGTCTAGTCATTATCATCCAGCTATATCAACACTGGCCTCGGGCATTTCAAGCATGAGTACTGCACATAACCAGATCCTTTTATCCAAGTCCTCTCCTCAACAAGCTTATAAGGAAATGTCTCTGGACCAGGAATTATGTTTCACACAACAGAGTGACGGTATAAAATTAAATAACAAGAAGAGACGTGCAAATGGCCCTGCTATTTCACCTTCCATTGGTTCTACAACAGTTACGAGTTCATTTGATGACAATGAATTGCAAAGGCAACTTAGTTCCCATTTTATGGTTCTTCATGACATAAAGGAGAATGAAAGGTTGAGAAAGGAGTTGGATAGGACTGCTCTATCACTACAGCTATATGAACAATATAAGAAACAAAAGAAACGATCAAAACCAAGTAGATGA 2496 0.4083 MGKKKDKIVLPPELPPEIPDDEVEVSDDDLQFVKENRAYASLLSTLDTHSITKHVSRVADAKDDALEKLYEKRMQKNALKKEKEETGLQVDRVDALPIKTLDGKIHYRTATKTVSENDPSEEGTGEDVNKDKGMVKLTKAEKRAKLKKMRKEAKQQGKEVAKAEVEETPQAAVLAEVKEDLTVEEAFESKKHKLAELGNALLTDPESNIKFLKEMVQISKDNDDTIVKLGLLSLLAVFKDIVPGYRIRLPTEKELEMKVSKTVRKMRYYESTLLSAYKAYLQRLVVLEKKPLFQHVAVRCICSLLDANPHFNFRESLLDATVGNISSANEAIRKLCCSTIKSLFENEGKHGGEVTVEAVRLIANHVKAHNCQMHPDSVGVFLSLSFDEDLVMAKRIEDEQKFKNNKSKKRKNLEASNQLENERKKSRKEMISKTREEVEADYKAASLAPDVMEKKHMQTETLSAVFETYFRILKHTMQSIRARPEANTGALSSAVELLPLLAPCLKGLAKFSHLIDLDFMGDLMNHLRVLASGSSNSGNTSDKCSKCLTVSERLQCCIVAFKVMRNNLDALNVDLQDFFLHLYNLVLEYRPGRDQGEVLAEALKIMLCDDKQHDMQKTAAFIKRLATLSLCVGSADSMAALVTVKHLLQKNVKCRNLLENDIGGGSVSGTIHKYLPYSTDPNLSGALASVLWELNLLSSHYHPAISTLASGISSMSTAHNQILLSKSSPQQAYKEMSLDQELCFTQQSDGIKLNNKKRRANGPAISPSIGSTTVTSSFDDNELQRQLSSHFMVLHDIKENERLRKELDRTALSLQLYEQYKKQKKRSKPSR 831
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g02324 831 Coils Coil 405 436 - -
Gma10g02324 831 Coils Coil 139 166 - -
Gma10g02324 831 Pfam CBF/Mak21 family 554 709 IPR005612 -
Gma10g02324 831 PANTHER NUCLEOLAR COMPLEX PROTEIN 3 3 778 IPR016903 -
Gma10g02324 831 SUPERFAMILY ARM repeat 204 628 IPR016024 -
Gma10g02324 831 PIRSF Noc3 1 811 IPR016903 -
Gma10g02324 831 MobiDBLite consensus disorder prediction 110 131 - -
Gma10g02324 831 Coils Coil 66 86 - -
Gma10g02324 831 Pfam Nucleolar complex-associated protein 190 280 IPR011501 -
Gma10g02324 831 MobiDBLite consensus disorder prediction 401 432 - -
Gma10g02324 831 MobiDBLite consensus disorder prediction 1 22 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g02324 Gma-Chr10 50850077 50858457 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g02324 1 807 Core DNA Replication Machinery Family AT1G79150 57.753 0.0 901
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g02324 K14834 - gmx:100776136 1572.76