Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g02323 ATGGACCCTTCAAATCTTAAGATTCCCATGCCAAGCTGTGGTCAAAAGCCTGTTCCTTCCAAGGCGTGTTGTGTTATTGCTGAGTTTCTTCCTGGTGGAACATTGAAACAATATTTGTTTAAAAATAGGCAGAACAAACTTCCATATAAGGTTTTGATTCAGCTGGCTTTGGACCTCTCTAGAGGTCTTAGTTATCTACATTCAAAGAAAATTGTTCACCGCGATGTAAAAACTGACAATATGTTGTCAGATGCCAATCAAAATGTGAAAATGGCTGATTTTGATGTTGCTCGTGTTGAAGCTATAAATCAAAGTGAGATGACAGGTGAAACTGGAACCTATGAATTATGGCACCGGAGGTTTTAA 366 0.3852 MDPSNLKIPMPSCGQKPVPSKACCVIAEFLPGGTLKQYLFKNRQNKLPYKVLIQLALDLSRGLSYLHSKKIVHRDVKTDNMLSDANQNVKMADFDVARVEAINQSEMTGETGTYELWHRRF 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g02323 121 ProSiteProfiles Protein kinase domain profile. 1 121 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma10g02323 121 SUPERFAMILY Protein kinase-like (PK-like) 21 114 IPR011009 -
Gma10g02323 121 Pfam Protein tyrosine and serine/threonine kinase 20 104 IPR001245 GO:0004672|GO:0006468
Gma10g02323 121 PANTHER KINASE ATMRK1, PUTATIVE-RELATED 1 114 - -
Gma10g02323 121 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 1 114 - -
Gma10g02323 121 Gene3D Transferase(Phosphotransferase) domain 1 12 118 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g02323 Gma-Chr10 50842023 50842610 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g02323 1 113 MAP Kinase Kinase Kinase AT3G22750 65.487 8.83e-50 160
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Gma10g02323 PK_Tyr_Ser-Thr 1.2e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g02323 - - gmx:100807899 207.608