Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g02322 ATGGACACGCCAGATAGGAGCAAGATCAACACCCCTCTTTCCCAATTTGAGGATTCGCCTGTATTTAACTATATCAGTAATCTATCTCCTATAGAGCCCGTTAAATCAGTTCACCTTACTCATACATTCAACTCATATAGCTTTTCATCACCTCCATCGGTTTTCACATCACCCCATGGCAACTGTCACAAGGAATCCAGATTCCTCAAGAGGCATAACCTTTTGGAGACATCCAAACCTAAGGTTTGGTCTGAAGATGTAAATAGTGTTTATTCATCTGAAGAGACTCTTGCAGATTCAACTCAAGCATGTCATGAATCAAGTGAGCAACAGGAAAATACTGCTCAAAAGATTTCCATTGGAGATGCCTCAATTGAGCCATGTAACGAAAACCCAAATATCTCAATTGAGCTTCCACAAGTCTTAAAATGTAATTTGGGTAGCCCTGGGTATGAACCTCTACTCTGCTGTGATGAGGCTAACTCTCTTTTGGAATTACCCGGCAATGGCAAGCCAGCATCAGATGTTGCTTATGTTCCAGAAGGCTCTGAAAAAGATTCAATTGAGGGTGAGATGCATCTTCTGGGGTTATGTCAGATTGAGGAGGCAAAAGTTGAAGGCCCAAATTGTGGTGTGGATAGTTTAATTACTGAAGTCTCTGATCTGTTAATGCTTAGCCCCCCAAATGTGACAGAAGCTTTTAAGGGTTTAAATAAACAATTAAATCCTTCAATAGAGCTTGGCAATTTCATGACTTTGATACCACAATCTGCCACCAATGATGGTCAACAAATGCACATTGGTAATGCAGTTGCTTCTGGTTCAGAACATGAAATTGAAGATCATCCTTCTGAATCAGCAGCTGCCACAGGCACAGGTCAGAGACAGGACAATCTTGCCAATGTTGCTTTGGTGGCTAGCCATCCAAGTGAAAATATGGATAATAAGCTTGTTTATGCGAGACACCGTGGTATACGAAGACGCTGTCTAGATTTTGAGATGGCCATTGTGCAATGGAAGAACCCAGCTGATAATTCAAACACCAACTCAAGTACAGCAATATCTGATGAGGGGAATGTTGGTAATGAAAAGCAACTGCTTCCCACAAAACACAGTGGGGATTCACGGAGGTGTGTTTTGCCAGGAATTGGTTTGCACTTGAATGCACTTGCAAGCTTAAAGGATTGCAAAAATGTAAAAATTGAAAATTTGTCATCTGGAAGGCAACCTAATCTGCACTGCTCTCCTTCATCTGTGCAACTCTCTGCAAGCCAAGAACTTCAACTATCATTGGTACCTGCATCGTCAGAAATAGATTTGGTGCCATCAGAGAATGAGGTTCAGCCTGGTGAAGATTTCCAGCAGAATAGCCCAAAAAAGAAAAGGCAATTGGAACCAGCTGGGGAAGGGGAGTCTTGCAAGCGTTGTAATTGTAAGAAATCAAAATGTTTGAAGCTTTATTGTGAGTGCTTTGCTGCTGGAGTCTACTGCATAGAACCTTGTGCATGCCATGATTGCTTCAATAAACCTATTCATGTTGAGACTGTTCTTCAAACTCGCCAGCAGATTGAGTCTCGTAATCCACTTGCATTTGCTCCTAAAGTCATACGAAGTTCTGATTCTGTATCTGAAATTGGGGATGACCCTAACAAAACTCCAGCTTCAGCACGACACAAAAGAGGATGTAATTGCAAGAAATCAAGCTGCCTAAAGAAATATTGTGAATGTTATCAGGGTGGTGTTGGTTGCTCCATAAGCTGTAGATGTGAAGGATGCAAGAACACATATGGTAGAAAGGATGGTTCTGTTCCTTCTGGATTAGAAGCCGAGCCCGAAGAAGAAACAGAAGCATGCGAAAAGGGTGTGGTGGAAAATGCTTCCCTGAAAACTGAAACAAAGAATACCGAAGACCATCCGGACCAATCTCTTGCTACAACACCATTACCACTTTCCAGATCATTGCTTCCATTATCCTTTTCATCAAAGTGTAAGCCACCAAGATCTTCTGTTATTACCATCTCCAGTTCCGGATTGCTTGTGGGGCAAAAGCTTGGGAAATCAAATGCTCCGTGGTCTCAATCTCAACCTAAATGTGAAAAGCCTTTGGAAACTGTTCCAGATGATGACTCTTCTGTCACCTGCATCAAAACTTCTTCTCCCAATGGCAAGAGGATCTCCTCTCCTAATTGTAAGGTGGGATCATCACCTACTCGCAGAGGTGGGAGGAAGTTGATATTACAATCTATCTCTTCATTTCCTTCTCTCACCCCTCACCATTAG 2280 0.4219 MDTPDRSKINTPLSQFEDSPVFNYISNLSPIEPVKSVHLTHTFNSYSFSSPPSVFTSPHGNCHKESRFLKRHNLLETSKPKVWSEDVNSVYSSEETLADSTQACHESSEQQENTAQKISIGDASIEPCNENPNISIELPQVLKCNLGSPGYEPLLCCDEANSLLELPGNGKPASDVAYVPEGSEKDSIEGEMHLLGLCQIEEAKVEGPNCGVDSLITEVSDLLMLSPPNVTEAFKGLNKQLNPSIELGNFMTLIPQSATNDGQQMHIGNAVASGSEHEIEDHPSESAAATGTGQRQDNLANVALVASHPSENMDNKLVYARHRGIRRRCLDFEMAIVQWKNPADNSNTNSSTAISDEGNVGNEKQLLPTKHSGDSRRCVLPGIGLHLNALASLKDCKNVKIENLSSGRQPNLHCSPSSVQLSASQELQLSLVPASSEIDLVPSENEVQPGEDFQQNSPKKKRQLEPAGEGESCKRCNCKKSKCLKLYCECFAAGVYCIEPCACHDCFNKPIHVETVLQTRQQIESRNPLAFAPKVIRSSDSVSEIGDDPNKTPASARHKRGCNCKKSSCLKKYCECYQGGVGCSISCRCEGCKNTYGRKDGSVPSGLEAEPEEETEACEKGVVENASLKTETKNTEDHPDQSLATTPLPLSRSLLPLSFSSKCKPPRSSVITISSSGLLVGQKLGKSNAPWSQSQPKCEKPLETVPDDDSSVTCIKTSSPNGKRISSPNCKVGSSPTRRGGRKLILQSISSFPSLTPHH 759
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g02322 759 MobiDBLite consensus disorder prediction 446 472 - -
Gma10g02322 759 PANTHER PROTEIN TESMIN/TSO1-LIKE CXC 2 1 759 IPR044522 GO:0003700
Gma10g02322 759 PANTHER PROTEIN TESMIN/TSO1-LIKE CXC 2 1 759 - -
Gma10g02322 759 ProSiteProfiles CRC domain profile. 472 597 IPR005172 -
Gma10g02322 759 MobiDBLite consensus disorder prediction 685 699 - -
Gma10g02322 759 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 560 595 IPR005172 -
Gma10g02322 759 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 474 509 IPR005172 -
Gma10g02322 759 MobiDBLite consensus disorder prediction 455 472 - -
Gma10g02322 759 SMART CXC_2 471 512 IPR033467 -
Gma10g02322 759 SMART CXC_2 557 598 IPR033467 -
Gma10g02322 759 MobiDBLite consensus disorder prediction 273 295 - -
Gma10g02322 759 MobiDBLite consensus disorder prediction 710 734 - -
Gma10g02322 759 MobiDBLite consensus disorder prediction 343 359 - -
Gma10g02322 759 MobiDBLite consensus disorder prediction 685 742 - -
Gma10g02322 759 MobiDBLite consensus disorder prediction 343 373 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g02322 Gma-Chr10 50831587 50836809 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g02322 11 759 CPP Transcription Factor Family AT3G22780 40.633 7.70e-149 449
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CPP Gma10g02322 TCR 2.3e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g02322 - - gmx:100820491 1480.31
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g02322 10 50831587 50836809 Gma20g01393 20 41010696 41016340 GST