Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g02318 ATGGCCTCTCATTCCCCAAAGAGAGAAGGCCCTTATTATCTTAATATTGTACTATTCCTTACCATTCTCATCTCCATCATCAACCCTTCACACCAAGACCCTTCTTCCCCTCTCCCCCCAATAAACCCAAGACTCACCAAAGCCTACACAGCACTCCAAGCATGGAAACACAAGATCACCTCAGACCCCAAAAACTTCACCTTAAACTGGTGTGGCCCCAATGTTTGCAACTACACTGGCATATACTGTGCACCAGCCCTAGATGATCCTCACATCTACACTGTTGCTGGAGTTGACCTAAACCATGCCACCATATCTGGCTCATTGCCAGAAGAACTTGGCCTCTTAACTGACCTATCACTTCTCCACATAAACTCCAACCGTTTCTGTGGTTCTCTTCCCACTAGCTTCGACAAACTTCACCTCCTCCATGAACTTGACATCAGCAACAACCAATTCTCGGGACCATTCCCCGAAGTTGTTCTTTGCATCCCTAACTTAAAATACTTGGATATCAGATTCAACAACTTCCACGGCAACGTTCCCTCGCGCCTCTTCGATGTCAAACTCGATGCACTTTTCATCAACAACAACAATTTCCAATTCTCGTTGCCCAATAATTTCGGGAACAGTACTGCTTCTGTGGTCGTGTTTGCGAACAATGACCTAAAAGGGTGTCTTCCTTCGAGTTTGGTTAAAATGAAGGGTACCCTTAACGAGATTATCATCACCAACAGTGGCTTAACGGGGTGTTTGCCTAGTGAGATAGGGGATTTGGACATGGTCACGGTGTTTGATGTGAGCTTCAACAAGTTGGTTGGAGAACTGCCTGAGTCATTGGGAAGAATGAAGAAGTTGGAGCAGCTGAATGTGGCGAATAACGAGTTGTCTGGTGAGATTCCTGAGAGTGTTTGCATGTTGCCGAGGTTGGAGAATTTCACGTACTCTTATAACTACTTCTGCAGTGAGTCACCAACGTGTCTCAAGTTGAAGGATAAGGATGATACCAAGAATTGTATTCCTTATAGGCCATTGCAAAGGTCACTGGATGAGTGTAAGGCTTTTTATGCACATCCTGTTCATTGTAGTGCCTTTGGTTGTGCATCGCCGCCGCCGCCACCTCCTCCTCCTCCGCCGCCGCCGCCACCGGCAACTTACCACCACTATCCCTGA 1173 0.4672 MASHSPKREGPYYLNIVLFLTILISIINPSHQDPSSPLPPINPRLTKAYTALQAWKHKITSDPKNFTLNWCGPNVCNYTGIYCAPALDDPHIYTVAGVDLNHATISGSLPEELGLLTDLSLLHINSNRFCGSLPTSFDKLHLLHELDISNNQFSGPFPEVVLCIPNLKYLDIRFNNFHGNVPSRLFDVKLDALFINNNNFQFSLPNNFGNSTASVVVFANNDLKGCLPSSLVKMKGTLNEIIITNSGLTGCLPSEIGDLDMVTVFDVSFNKLVGELPESLGRMKKLEQLNVANNELSGEIPESVCMLPRLENFTYSYNYFCSESPTCLKLKDKDDTKNCIPYRPLQRSLDECKAFYAHPVHCSAFGCASPPPPPPPPPPPPPPATYHHYP 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g02318 390 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 22 374 - -
Gma10g02318 390 SUPERFAMILY L domain-like 48 328 - -
Gma10g02318 390 Gene3D Ribonuclease Inhibitor 48 214 IPR032675 -
Gma10g02318 390 Gene3D Ribonuclease Inhibitor 215 341 IPR032675 -
Gma10g02318 390 MobiDBLite consensus disorder prediction 369 390 - -
Gma10g02318 390 Pfam Leucine rich repeat N-terminal domain 50 83 IPR013210 -
Gma10g02318 390 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 6 22 374 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g02318 Gma-Chr10 50805301 50806825 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g02318 27 375 Leucine-rich Repeat extension Gene Families AT3G22800 66.667 9.74e-164 466
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g02318 - - gmx:100818195 738.799
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g02318 10 50805301 50806825 Gma20g01397 20 41041200 41042731 GST