Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g02312 ATGAACGGCGGCGCCACCACCGCCACCTTCCGATCCATCCTCGACAAGCCCCTCAACCAGCTTACCGAGGATGACATTTCTCAGCTCACTCGCGAAGACTGTCGCAGATTCCTCAAAGAAAAAGGGATGCGTAGGCCTTCCTGGAACAAATCGCAGGCGATCCAACAGGTCATTTCCCTGAAAGCGCTGCTGGAACCTTCCGACGATGATACTCCTCCTCCTCCTCCTCCCGCCATGCACCACCGTAGCCATGCTCAACCTCAACCTCAAGTGAATTTGAGTGAACCTCCTCCTCCTCCGCCCAAGGCTCCGCCACCTGAAGAACCCGCTTTTCATGCTGCTGAAGACATTCAGAAATCTGCGTCGTCTGGGGAAAAGCCTACGGAAACTAATGACACCAACACCAACGTTGCTAGCCCCAAAGGGTGTGCAACTAGTGGATCATTTGGGCAAATGACAATTTTCTATTGTGGTAAGGTGAATGTCTATGACAGAGTCTCGCCTGATAAGGCACGAGCAATCATGCAGCTTGCAACGAGTCCAGTCCAGCTTACTCAGGATGATCCTTTAAATGGAAATGCAGCTGTTTGGACTTCTCCTTGCCACTTACCGATGGATAAGGATGTCCTCGTTCCTGTTGATACTACAATCCTTCAGGTTGCTCAAGCAGATAAGATGGTGGAGTATCCTCTGCAATATAGGGAGAAAGGGAGCATAGCTCGTGATGCTGATGTAGAGGGTCAGGAACACCGAAAAGTGTCATTGCAACGATATCTTGAAAAGCGTAAGGACAGGGGAAGATTGAAAGGCAAGAAATTGACTGGGATAACTTCATCTAACTTCGAGATGTATTTGAACCTTCCAGTGAAGGTCCATTCCTCAAATGGGAATTCAAGCCGTAGCAGTACTAGCTCTCCACCACAACCTAGACTGCCTCTAGTTTCCAGTGGTTCAGATCAGCTAAAGGTTGCCCTTCCCATTGATCTCAATGACAAAGATGTTCAAGAATGCTAA 1014 0.4892 MNGGATTATFRSILDKPLNQLTEDDISQLTREDCRRFLKEKGMRRPSWNKSQAIQQVISLKALLEPSDDDTPPPPPPAMHHRSHAQPQPQVNLSEPPPPPPKAPPPEEPAFHAAEDIQKSASSGEKPTETNDTNTNVASPKGCATSGSFGQMTIFYCGKVNVYDRVSPDKARAIMQLATSPVQLTQDDPLNGNAAVWTSPCHLPMDKDVLVPVDTTILQVAQADKMVEYPLQYREKGSIARDADVEGQEHRKVSLQRYLEKRKDRGRLKGKKLTGITSSNFEMYLNLPVKVHSSNGNSSRSSTSSPPQPRLPLVSSGSDQLKVALPIDLNDKDVQEC 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g02312 337 MobiDBLite consensus disorder prediction 121 140 - -
Gma10g02312 337 Pfam tify domain 151 178 IPR010399 -
Gma10g02312 337 MobiDBLite consensus disorder prediction 292 315 - -
Gma10g02312 337 Pfam Jas motif 251 265 IPR018467 -
Gma10g02312 337 ProSiteProfiles Tify domain profile. 145 180 IPR010399 -
Gma10g02312 337 SMART tify_2 145 180 IPR010399 -
Gma10g02312 337 MobiDBLite consensus disorder prediction 64 140 - -
Gma10g02312 337 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 7 316 IPR040390 -
Gma10g02312 337 MobiDBLite consensus disorder prediction 292 319 - -
Gma10g02312 337 MobiDBLite consensus disorder prediction 91 108 - -
Gma10g02312 337 PANTHER PROTEIN TIFY 4B-LIKE ISOFORM X1 7 316 - -
Gma10g02312 337 MobiDBLite consensus disorder prediction 68 82 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g02312 Gma-Chr10 50715790 50721122 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g02312 1 286 Tify Gene Family AT4G14720 47.039 1.19e-69 218
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Gma10g02312 tify 1.5e-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g02312 - - gmx:100813937 597.816
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g02312 10 50715790 50721122 Gma20g01402 20 41137997 41143817 GST