Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g02302 ATGGAGGAGGAAGAAGAGATTGAGTGCTTCGAGTGCCTCCAACTTCGAATAAAGTCCGATTTCTCGGAGCAAGTGTTCTTCAATTATGCCATCTCCACTTCTGCTTTTCCTTTCGGATCCTCGGCTATCGTTAATATTTCTGGTACAGCTGATGGCGAAGCTTCGGGCGCTCAATTTATATTGCAGTACATGCCGAGTCGTGATAAGAATTGTTTCATCAATTATGTAAATGAATATATTTTGGATAGTGGTGAAATCACTACTAGGAGTAGTGATCCTGGTATTGGAAGCAGTGAAGATAATAATGCTGTTAATGTTAGAATTACATCATCAGATGATTCTGACAGTGGCAAAGCTTTTTCTGGAAGCACGAGTTGTAGTCATTCTGAAAGGTTTTCTTGCTTGAGGACAATCACTTCACTCGCGCCTGTTGCTCGTGTGGGAATATCTTCCTATTCCACATTTCAAGAGGTCTCTACTGATTTCTTGTCTGGGTTAATCGAGGATCACGTCTTAGAGTCGCTTGATCTCTTCATTGAAGGGAAAGCGTCTGGACGGGACAGTGTAAATTTCCTTAGTTTAATTGGGTTGCCATCATTTGAAGAGGATCCTTTTCCAGGCTCTTTGAGGCATCCCAACATAGCTCCTGTCCTTGCAATTTTTAAAACATCTGATCACGTTAATGTAGTGCTTCCAAAGAATCCATACAACTTGGAAAGTATTCTTCATTTTAACCCCGATGCATTAAAGTCTAATTGGAATAGAATATTTCTTATGTATCAGCTACTCTCAGCCTTATCGTACATACATGGTTTAGGGGTTTCTCATGGTAATATATGCCCATCCAATATCATGTTGACTGACTCATTATGGTCTTGGCTGAGATTATGGAATGAACCCGTATTGGAATCTAATTTAACTTTGCAAGAGAGTGAAAGAGTTAATTCCGAACCTGCAAGAATTGGTTGTTGTAATGTTGGTTGTCGTTCTTATGGCCTTTATGCTGATCTAAGGCTTTCTCCAACAATAGATTGGCAATCTTGCTTTCATAAATGGTGGAGAGGAGAATTAAGTAATTTTGAATATTTACTCATCTTAAACAGATTAGCAGGAAGAAGGTGGGGGGACCATACATTTCATCCAGTAATGCCTTGGGTAATTGATTTTAGCTCAAAACCTGATGATAATTGTGACACAGGGTGGCGAGACTTGAGCAAGAGCAAATGGCGCTTAGCAAAAGGTGATGAACAATTGGATTTCACCTATTCAACATCTGAAATCCCTCATCATGTTTCAGATGAATGTCTGTCTGAATTGGCTGTCTGTAGTTATAAAGCAAGAAGACTCCCTTTGAGTGTTCTCCGAGTGGCTGTTCGTTCAGTGTATGAACCTAATGAATATCCTTCCACAATGCAGAGGCTCTATCAATGGACCCCTGATGAATGCATTCCAGAGTTTTACTGTGATGCCCAAATTTTTAAGTCAATACATGATGGAATGGCTGATTTGGCTGTACCCTCTTGGGCGGAGAGTCATGAGGATTTCATTAAATTGCATCGTGATGCATTAGAAAGTAATAGGGTGTCATTTCAACTCCATCATTGGATAGATATAACCTTTGGTTACAAAATATCTGGCCAGGCTGCTATTGCTGCTAAGAATGTTATGCTTCCTATATCAGAACCCATGATGCCAAGATCAACAGGACGTCGTCAGCTCTTTACACAACCACATCCTATCCGTCATGCCACTACCAGTACAAAACGTCATGGTTCCAATAAATATGCCAAAGTTTGGAGTCAAGCAAATGCAACGCACCGAGAGACATCTCTTCTATCTGAAACTGCTTATCTACAAGAACTAGAGCAAGCATCTACATTTTCTGAACATGCTAGGCATTTGAATGCCTTTTACCACTATCCCTTGAATCAAACGAGAGGGAAGAATATCTCATCTTCGGGAGATCCAACAACTGAGACATTTAGTGAAAGTATAAGCAAACTATCTTTGATTGACAGAAATTACCAGGTGCCATATAAAATGAATCTAATATCTTTTCTTCAACATATGAAAGAGGAAGATAAAGGCTCCTCAGGATATCCAGACTTGCTACTCTGGAAGCAGAAATTATCTTCTTCAAGACTTTGCTCTGAAGATATTGCTAGGGACATATTTTCTGTTGGTTGTCTCTTGGCTGAACTTCATCTTTGCAGGCCGCTCTTTGATCCAATCTCATTGGCAATATACTTGGAAGATGGAACTCTACCAGGGTATCTGCAGGATCTACCTCCTGATATTAGATTACTTGTTGAAGCATGCATCCAAAAGGATTGGATGAGGAGGCCATCTGCCAAAATTCTTCTGGAATCTCCTTATTTTCCAAATACTGTCAAATCCTCCTACTTGTTTCTTGCTCCACTTCAGCTTGTAGCTAAAGATGAAACTCGTCTTCGTTATGCTGCAAATCTTGCAAAGCACGGAGCTCTCAGGGAAATGGGTACCTTTGCAACTGAAATGTGCACTACCTATTGCTTACCGCTTATAGTGACTGCTGTGAGTGATACTGAAGCTGAATGGGCATATATGCTACTGAAGGAATTCATGAAATGCTTAACAGTGCAAGCAGTGAAAACATTAATCTTGCCAACCATACAGAAAATTTTACAGGCTAACATCTTTTTTCAGACCACAAGTTATTTACGTTTAAAGGTTTCCCTTCTACAAGATTCATTTGTACGGGAAATATGGAATCGAGTTGGTAAACAAGCATACCTGGAAACTATTCATCCATTGGTCTTGTCAAACTTATACATTTCTCCAGATAAAAGTTCAGCTGCCTCTGCTTCAGTGCTTCTAATCAGTTCTAGTGAGGAACTAGGTGTACCTATTACCATCCATCAGACTATCTTGCCTCTTGTTCACTGCTTTGGGAAAGGACTATGTTCGGATGGCATTGATGTGCTGGTCAGAATTGGTGGCATTTTTGGGGAATTGTTTATCGTCAAACAGATGGTACCTTTACTGAAAAATGTTGTCCGTTCCTTCATTGATGTGTCATGCATGAATAAGCCTGATCCTGTCCAGAGTTGGAGTGCTTTAGCACTTATTGATTGCATGTTGACTTTAGATGGCCTTGTAGCTTTCTTGACAGAAGAGGTCATTGTAAAAGAGCTTCTTGAAGACCTAAGTTGCATACACATTGGGGTTCTTATGCAGAAACATATGGAAATTGCAGTGCTTCAGGTGGCTGCTTCTACTCTTTTTGGAATTTGTCAGCGGATTGGAGCAGATTTGACAGCATTGCATATTCTTCCAAAACTTAAAGAACTATTTGATGAGCTTGCTTTCTCCCAGGAAATTTCTAAAGGTTCAACTACTGTTGGCAGAAACTTGAAGGTTGGCAAAATAAAAATTGGAGGGGACTTGCATATTGAAAGTCGTATGGATCTAGTGTTGGTTCTCTATCCTTCCTTTGCATCTCTTCTTGGGATAGAGAAACTTCGTCAGTGTTGTGCTACATGGTTGATTCTTGAACAATATCTTCTACGCCATCATAATTGGAAGTGGGAATATGCTGGAGAATCATCAAAAAACGGCTCAGAAATTGTTCTTGCTAGAAGACCTGTAATAGCCCATGGATTTACATCTGAATACAATCCTGCAAAGCTGTTGCTTAATGGGGTTGGATGGTCAATTCCACAATCCCAAGGAAGAAGTGCCAAAAATTTGATCCCTCAGAGACAACCATTTAAAGTTCATCAAAGTCCAGTAGCAGTGCATGAAGAAATGTCATACCAAATGAACCATGAACCCTGGTTTTGGTTCCCTAGTCCAGCCACCATCTGGGATGGGCCTGAATTTCTTGGGAGGGTGGGGGTTCAGAAAGATGATCTTCCATGGAAGATCAGAGCAACTGTTATATACTCTATACGTGCACATCATGGAGCAGTGAGGTCTCTGGCTGTTAACCAAGACGAATGTACTGTTTTTACTGCAGGAATTGGCCAAGGATATAAAGGAACTGTTCAGAAATGGGAATTGAGCCGAACTAACTGTTTGTCCGGCTATCATGGCCATGAGGAGGTTGTGAATGATATTTGCATCTTATCATCTAGTGGAAGAGTGGCTTCTTGTGATGGAACAATTCACATTTGGAATAGTCAAACAGGGAAACAAATATTAGTATTTGCTGAGTCCCAGACAGAATCTGGCCATCCTACAAGCCATCCATCCTCTTCATCAAAAATTAACAGTGACCAGGCAAATGTGCTTAATTTGAATACACTATCCAGTGGAATATTGTCTAGTGCTTTTGACTCAAGCCTTTATACTTGTATGCATCTATTAAACTCCGCTGAAACTCTTGTAGTTGGAACTGGAAATGGTTCTCTGAGGTTCTTTGATGTTGCTCGAGGTCAAAAGCTTCATATCTGGAGAGGCGAATCTACTGAATCTAGTTTTCCTTCACTTATTTCTGCTATTTGTTCCACTGGCTCTGACAAGATGCAAGCAGGTGGAATTTCCACTTTTCCATCTTTTATTGCAGCTGGACTAAGTTCTGGGCACTGTAAATTATTTGATGCAAAGAGTGGAAATGTCATTTCCTCTTGGCGAGCTCATGATGGATATGTGACAAAGTTGGCAGCACCTGAGGAACATCTGCTTGTTTCCAGCTCTTTGGACAGAACTTTACGAGTCTGGGACTTAAGAATGAATTTATCATCGCAGCCCATTATTTTCAGAGGTCATTCAGATGGCATATCCAGTTTCTCCATTTGGGGCCAAGATGTTATTTCAATTTCCCGGAATAGAATTGGGCTTCTCTCCTTGTCTAAATCTCCCAATGAAACAGATGGGCAGCATCACATTAGCCCTCAGAAACTATATGTTTCTGATAATGGTCAGAGAAGCTTGTCAGCGTTATCAAGTATTAGTATACTTCCATTCTCTCGATTGTTTCTCATTGGAACCGAAGATGGTTATCTGAGAATCTGTTGTTAA 5001 0.4041 MEEEEEIECFECLQLRIKSDFSEQVFFNYAISTSAFPFGSSAIVNISGTADGEASGAQFILQYMPSRDKNCFINYVNEYILDSGEITTRSSDPGIGSSEDNNAVNVRITSSDDSDSGKAFSGSTSCSHSERFSCLRTITSLAPVARVGISSYSTFQEVSTDFLSGLIEDHVLESLDLFIEGKASGRDSVNFLSLIGLPSFEEDPFPGSLRHPNIAPVLAIFKTSDHVNVVLPKNPYNLESILHFNPDALKSNWNRIFLMYQLLSALSYIHGLGVSHGNICPSNIMLTDSLWSWLRLWNEPVLESNLTLQESERVNSEPARIGCCNVGCRSYGLYADLRLSPTIDWQSCFHKWWRGELSNFEYLLILNRLAGRRWGDHTFHPVMPWVIDFSSKPDDNCDTGWRDLSKSKWRLAKGDEQLDFTYSTSEIPHHVSDECLSELAVCSYKARRLPLSVLRVAVRSVYEPNEYPSTMQRLYQWTPDECIPEFYCDAQIFKSIHDGMADLAVPSWAESHEDFIKLHRDALESNRVSFQLHHWIDITFGYKISGQAAIAAKNVMLPISEPMMPRSTGRRQLFTQPHPIRHATTSTKRHGSNKYAKVWSQANATHRETSLLSETAYLQELEQASTFSEHARHLNAFYHYPLNQTRGKNISSSGDPTTETFSESISKLSLIDRNYQVPYKMNLISFLQHMKEEDKGSSGYPDLLLWKQKLSSSRLCSEDIARDIFSVGCLLAELHLCRPLFDPISLAIYLEDGTLPGYLQDLPPDIRLLVEACIQKDWMRRPSAKILLESPYFPNTVKSSYLFLAPLQLVAKDETRLRYAANLAKHGALREMGTFATEMCTTYCLPLIVTAVSDTEAEWAYMLLKEFMKCLTVQAVKTLILPTIQKILQANIFFQTTSYLRLKVSLLQDSFVREIWNRVGKQAYLETIHPLVLSNLYISPDKSSAASASVLLISSSEELGVPITIHQTILPLVHCFGKGLCSDGIDVLVRIGGIFGELFIVKQMVPLLKNVVRSFIDVSCMNKPDPVQSWSALALIDCMLTLDGLVAFLTEEVIVKELLEDLSCIHIGVLMQKHMEIAVLQVAASTLFGICQRIGADLTALHILPKLKELFDELAFSQEISKGSTTVGRNLKVGKIKIGGDLHIESRMDLVLVLYPSFASLLGIEKLRQCCATWLILEQYLLRHHNWKWEYAGESSKNGSEIVLARRPVIAHGFTSEYNPAKLLLNGVGWSIPQSQGRSAKNLIPQRQPFKVHQSPVAVHEEMSYQMNHEPWFWFPSPATIWDGPEFLGRVGVQKDDLPWKIRATVIYSIRAHHGAVRSLAVNQDECTVFTAGIGQGYKGTVQKWELSRTNCLSGYHGHEEVVNDICILSSSGRVASCDGTIHIWNSQTGKQILVFAESQTESGHPTSHPSSSSKINSDQANVLNLNTLSSGILSSAFDSSLYTCMHLLNSAETLVVGTGNGSLRFFDVARGQKLHIWRGESTESSFPSLISAICSTGSDKMQAGGISTFPSFIAAGLSSGHCKLFDAKSGNVISSWRAHDGYVTKLAAPEEHLLVSSSLDRTLRVWDLRMNLSSQPIIFRGHSDGISSFSIWGQDVISISRNRIGLLSLSKSPNETDGQHHISPQKLYVSDNGQRSLSALSSISILPFSRLFLIGTEDGYLRICC 1666
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g02302 1666 PANTHER GH12955P 6 1666 - -
Gma10g02302 1666 Gene3D - 1503 1666 IPR015943 GO:0005515
Gma10g02302 1666 Gene3D - 1281 1502 IPR015943 GO:0005515
Gma10g02302 1666 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 1537 1570 - -
Gma10g02302 1666 Gene3D BEACH domain 341 581 IPR036372 -
Gma10g02302 1666 SUPERFAMILY Protein kinase-like (PK-like) 208 291 IPR011009 -
Gma10g02302 1666 CDD Beach 351 581 IPR000409 -
Gma10g02302 1666 SUPERFAMILY WD40 repeat-like 1305 1664 IPR036322 GO:0005515
Gma10g02302 1666 ProSiteProfiles Trp-Asp (WD) repeats profile. 1537 1570 IPR001680 GO:0005515
Gma10g02302 1666 Gene3D Transferase(Phosphotransferase) domain 1 206 299 - -
Gma10g02302 1666 SUPERFAMILY Protein kinase-like (PK-like) 719 813 IPR011009 -
Gma10g02302 1666 ProSitePatterns Trp-Asp (WD) repeats signature. 1555 1569 IPR019775 -
Gma10g02302 1666 Pfam WD domain, G-beta repeat 1351 1386 IPR001680 GO:0005515
Gma10g02302 1666 Pfam WD domain, G-beta repeat 1532 1568 IPR001680 GO:0005515
Gma10g02302 1666 SMART Beach_2 349 581 IPR000409 -
Gma10g02302 1666 Pfam Beige/BEACH domain 351 561 IPR000409 -
Gma10g02302 1666 MobiDBLite consensus disorder prediction 90 126 - -
Gma10g02302 1666 CDD PKc 208 289 - -
Gma10g02302 1666 SUPERFAMILY BEACH domain 336 581 IPR036372 -
Gma10g02302 1666 ProSiteProfiles BEACH domain profile. 337 609 IPR000409 -
Gma10g02302 1666 SMART WD40_4 1631 1666 IPR001680 GO:0005515
Gma10g02302 1666 SMART WD40_4 1431 1468 IPR001680 GO:0005515
Gma10g02302 1666 SMART WD40_4 1303 1346 IPR001680 GO:0005515
Gma10g02302 1666 SMART WD40_4 1530 1568 IPR001680 GO:0005515
Gma10g02302 1666 SMART WD40_4 1349 1386 IPR001680 GO:0005515
Gma10g02302 1666 Gene3D Transferase(Phosphotransferase) domain 1 705 801 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g02302 Gma-Chr10 50653053 50662596 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g02302 721 799 MAP Kinase Kinase Kinase AT3G07980 38.095 8.80e-06 48.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDKL-Cr Gma10g02302 Beach 3.9e-44 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g02302 K17601 - gmx:100809116 3305
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g02302 10 50653053 50662596 Gma20g01410 20 41187249 41197208 GST