Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g02295 ATGGCCTCTAAAATCGAAAGCGAGAATTCAACCGATACTTCTCCATCATCGCCAAAGAACATATACAAAGATCCAGATGATGGGCAGCAGCGCTTTTTGCTTGAATTGGAGTTTGTTCAGTGCCTTGCCAATCCTACCTACATCCACTATTTGGCCCAAAATCGATACTTTGAGGATGAAGCATTCATTGGATACTTAAAGTATCTTCAATATTGGCAACGCCCTGAATATATTAAATTTATTATGTATCCTCATTGCCTCTATTTTCTTGAGCTGCTTCAGAATGCAAATTTTCGCAATGCAATGGCGCATCCAACCAATAAGGAACTGGCACACAGACAACAATTCTACTTCTGGAAGAACTATAGGAACAATCGGCTAAAACACATTTTACCAAGATCCCTTCCTGAACTTAGCGCCACACCTGCAGCTCCTGCTTCAACCTCATCTCAGGCACCTGTGTCTGCACTACCACCAGTACCTGCAACAAGTGTTGCTGTGACAGCAACACCTTCTCAAGCTCCTTCTCCAATGCCATATGGTATGCCCCCTGGCTCTGGTCTTGCAAAAAATGACATGAGGAATCCTACAGTTGATAATAGAAGGAAGAGAAAGTGA 618 0.4288 MASKIESENSTDTSPSSPKNIYKDPDDGQQRFLLELEFVQCLANPTYIHYLAQNRYFEDEAFIGYLKYLQYWQRPEYIKFIMYPHCLYFLELLQNANFRNAMAHPTNKELAHRQQFYFWKNYRNNRLKHILPRSLPELSATPAAPASTSSQAPVSALPPVPATSVAVTATPSQAPSPMPYGMPPGSGLAKNDMRNPTVDNRRKRK 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g02295 205 Pfam SOH1 29 122 IPR008831 GO:0003712|GO:0006355|GO:0016592
Gma10g02295 205 MobiDBLite consensus disorder prediction 1 20 - -
Gma10g02295 205 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 31 8 205 - -
Gma10g02295 205 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 31 8 205 IPR008831 GO:0003712|GO:0006355|GO:0016592
Gma10g02295 205 MobiDBLite consensus disorder prediction 1 22 - -
Gma10g02295 205 Gene3D Mediator of RNA polymerase II, submodule Med31 (Soh1) 17 119 IPR038089 -
Gma10g02295 205 MobiDBLite consensus disorder prediction 163 205 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g02295 Gma-Chr10 50550889 50553708 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SOH1 Gma10g02295 Med31 1.9e-35 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g02295 K15153 - gmx:100527879 393.275
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g02295 10 50550889 50553708 Gma10g02295 10 50550889 50553708 ECH
Gma10g02295 10 50550889 50553708 Gma20g01417 20 41289749 41292509 GST