Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g02286 ATGCCATCACGACAATTGTCAACGTTAGCACCGCCTCCCAACCACCACAACCACCGCGTCTCAACCCCTCTCGTTGCTTTCACCGCCTCCGTTTGCTCTGTTTTCTTTTTACTTCTCCTCTGCTTCCGCAAGCGTAAACGCACCACCCCCTCCTCCGACTCCGACTCTAACCCTCCTCATCCGTTCTCCTACCCCGTCCTCCGCCGCGCCACCAACTCGTTCTCGACTCGCCTCGGCCACGGCGGCTTCGGCCCCGTCTTCTCCGGCACCCTCGCCGGCGAGCCCGTGGCCGTCAAGCTCATGGACTCCGCTTCCCTCCAGGGCGAGCGCGAGTTCCACAACGAGCTCTTGTTCGCATCCAGACTCCGGTCCCCTTTAGTGGTCCCCGCAATCGGATTCTCCTCCGACCCCAAACGACGCCGTTTCCTCCTCGTCTATCACCTCATGCACAACGGCAACCTCCACGACGCTCTCTTGCGACGCAAAACCCCTCACCTCACGCTCTGGAAAAACCGCTTCTCCATAATCCTCGACGTCGCAAAAGGAATCCTCTACCTCCACTCCCTCGACCCCCCCATAATCCACGGCGACATCAAACCTAGCAATATTCTTCTCGACAATTCCTTCTCCGCAAAACTCGCTGACTTTGGCCTCGCGCGCTTAAAATCGGAGATAGAAGAATTCAAACTAAAACGCGAGGAAAAGAAAAAGGAAGAGTCAGAGAGCGACGCCGGGTCCGAATTAGAAACTCAGAGCGTCAACACTGAACAGTCATTTGATGATGCTGGTAGACAGAACACTGCCTCGGATTATGTGAAGGATTGGATTGGGAAGGAGGTGAAAAAAGAAAGGCCGAACGAGGTGAAGAAGAATGGTTATGCTGTTGCTGCAGCATCGAGTAGCGGAATTGTGGAGAAGAAGAAAAGTAGTAGGAAGAAATTGGAATGGTGGGAATCCATGGACGATAGTGGAGTTTTGAAGAAGGAAAAGAGAAGGCAAGCGAGGGAATGGTGGAAGGAGGAGTATTCGGAGGAGCTTTCAAGgaagaaaaagaagaagaagaagaagaagaagaagaagaGAAAGGGTAATGATGATGATGGTGATAATAATGTGGAGGTAGATGATGTGTACGGTGATGCACATGGTTACAAGAGGGAGAAGAACCGGAGTAGGAAAAGTGGTGGCAGTGTAGATTCATGGTTCAGCGGGGAGCTACGTGGAATTGGGTGGAATAGTTATGATTCAGCGACGGGGAGTGGAGAGATAGTAGCAAAGAGTGGGGGTGTGAGTAGCACTCCGAGTATGAGGGGAACGGTTTTCTACGTTGCACCCGAGTATGGTTACAATGGGGATGCGTCAGAGAAGTGTGACGTGTACAGCTTGGGGGTATTGTTGCTGGTTATTGTATCAGGGAGGAGACCGCTTCAGGTGAGCGGTTCGGCGATATGGGAGTATAAGCGTGCGAATCTGGTGTCTTGGGCGAGGCAATGCGAGCGGAGAGGGAAGCTTCTGGAAGTGGTGGATGAGAGCGTTGAAGGGTTGGATAAAGAGCAGGCTAGTCTGTGCGTGACGGTTGCGTTGATGTGTTTGCTAAAGTCACCTGCTCGTCGTCCTTCCATGAAGGAGGTTGTGGGAATGCTCAGTGGGGAGATGGAGCCTCCGCAGTACTCACTGCAGCAGCAAAAGGCCAAGTTCCCGTTCCAGCCTCCGAAAGCTTGCATTGCAAATCATGGTCCGTGCTTTAGTTTTGTGGAGGGCCATCTTTTGTACTAG 1776 0.5186 MPSRQLSTLAPPPNHHNHRVSTPLVAFTASVCSVFFLLLLCFRKRKRTTPSSDSDSNPPHPFSYPVLRRATNSFSTRLGHGGFGPVFSGTLAGEPVAVKLMDSASLQGEREFHNELLFASRLRSPLVVPAIGFSSDPKRRRFLLVYHLMHNGNLHDALLRRKTPHLTLWKNRFSIILDVAKGILYLHSLDPPIIHGDIKPSNILLDNSFSAKLADFGLARLKSEIEEFKLKREEKKKEESESDAGSELETQSVNTEQSFDDAGRQNTASDYVKDWIGKEVKKERPNEVKKNGYAVAAASSSGIVEKKKSSRKKLEWWESMDDSGVLKKEKRRQAREWWKEEYSEELSRKKKKKKKKKKKKRKGNDDDGDNNVEVDDVYGDAHGYKREKNRSRKSGGSVDSWFSGELRGIGWNSYDSATGSGEIVAKSGGVSSTPSMRGTVFYVAPEYGYNGDASEKCDVYSLGVLLLVIVSGRRPLQVSGSAIWEYKRANLVSWARQCERRGKLLEVVDESVEGLDKEQASLCVTVALMCLLKSPARRPSMKEVVGMLSGEMEPPQYSLQQQKAKFPFQPPKACIANHGPCFSFVEGHLLY 591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g02286 591 SUPERFAMILY Protein kinase-like (PK-like) 56 561 IPR011009 -
Gma10g02286 591 Pfam Protein tyrosine and serine/threonine kinase 74 231 IPR001245 GO:0004672|GO:0006468
Gma10g02286 591 SMART serkin_6 72 548 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma10g02286 591 Coils Coil 339 359 - -
Gma10g02286 591 Pfam Protein kinase domain 432 545 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma10g02286 591 MobiDBLite consensus disorder prediction 348 376 - -
Gma10g02286 591 Gene3D Transferase(Phosphotransferase) domain 1 59 251 - -
Gma10g02286 591 MobiDBLite consensus disorder prediction 232 264 - -
Gma10g02286 591 PANTHER RECEPTOR-LIKE SERINE/THREONINE-KINASE PLANT 1 574 - -
Gma10g02286 591 MobiDBLite consensus disorder prediction 246 264 - -
Gma10g02286 591 Coils Coil 218 241 - -
Gma10g02286 591 Gene3D Transferase(Phosphotransferase) domain 1 417 568 - -
Gma10g02286 591 ProSitePatterns Serine/Threonine protein kinases active-site signature. 193 205 IPR008271 GO:0004672|GO:0006468
Gma10g02286 591 PANTHER OS07G0586332 PROTEIN 1 574 IPR044576 -
Gma10g02286 591 ProSiteProfiles Protein kinase domain profile. 72 557 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g02286 Gma-Chr10 50464340 50466344 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g02286 426 545 Receptor kinase-like Gene Family AT3G58690 38.095 3.15e-13 70.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XI Gma10g02286 PK_Tyr_Ser-Thr 2e-24 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g02286 - - gmx:100817816 1021.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g02286 10 50464340 50466344 Gma10g02286 10 50464340 50466344 ECH
Gma10g02286 10 50464340 50466344 Gma20g01428 20 41395264 41397441 GST
Gma16g01648 16 37466776 37469891 Gma10g02286 10 50464340 50466344 PCT
Gma09g01440 09 38741556 38744521 Gma10g02286 10 50464340 50466344 PCT
Gma10g02286 10 50464340 50466344 Gma16g01648 16 37466776 37469891 PCT
Gma10g02286 10 50464340 50466344 Gma09g01440 09 38741556 38744521 PCT