Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g02283 ATGCAGTTTAAATGTTTCAGTTGTTTTCTTTGTGAAAAGGAGCAATCAGAAATACAGAATGCCAACAAGAAAAATAGGGACTATCCATGGGAAATATACACCTTGAAGGAGTTGCTTCGTGcaacaaacaattttcatcaagatagcaagataggagagggtggatttggaagtgtttattggggtcgAACAAGTAAAGGCGTCGAGATTGCAGTGAAGCGCTTGAAGACTATGACTGCAAAGGCAGAGATGGAGTTTGCAGTTGAAGTGGAAGTACTAGGAAGAGTGAGGCATAAGAATTTGTTAGGCTTGCGTGGATTCTATGCAGGAGGCGATGAACGGTTGATTGTCTATGATTACATGCCTAATCACAGTTTACTCACCCATTTGCATGGTCAACTTGCCACGGATTGTTTACTAGATTGGCCTAGAAGAATGAGTATAGCAATTGGAGCTGCAGAAGGCTTAGTGTATTTGCACCATGAAGCAAATCCTCACATCATTCATAGAGACATAAAGGCAAGCAATGTTCTTTTAGACACTGAATTTGAAGCCAAGGTTGCTGATTTCGGTTTTGCTAAGTTGATACCAGAAGGTGTAAGCCATCTCACAACAAGGGTTAAAGGCACCCTTGGATATTTGGCGCCAGAGTATGCTATGTGGGGGAAGGTTTCTGGGAGCTGTGATGTTTACAGTTTTGGGATTTTGCTTTTGGAGATTGTGAGTGCCAAGAAACCAATTGAGAAACTCCCTGGTGGAGTGAAAAGGGACATAGTTCAATGGGTCACACCACATGTCCAAAAGGGTAACTTCATTCATATTGCTGATCCAAAGTTGAAGGGGCATTTTGATTTAGAGCAATTGAAATCTGTGGTCATGATAGCTATGAGGTGCACAGATAATAGCCCAGAGAAGAGGCCTACCATGCAAGAGGTGGTGGAGTGGCTCAAGGGTGGTATAGGGAGAAGAAAAAAAGAGATTCCATATTTGAGTTACAAGACTGAAGATGACAAATATGAGGAAAACTATGGAGAGATTAGAACAACGCAGTCCAAATTCAAAATAGCAAGTGATAATGATAAACTTAAAATAAGATAA 1098 0.3852 MQFKCFSCFLCEKEQSEIQNANKKNRDYPWEIYTLKELLRATNNFHQDSKIGEGGFGSVYWGRTSKGVEIAVKRLKTMTAKAEMEFAVEVEVLGRVRHKNLLGLRGFYAGGDERLIVYDYMPNHSLLTHLHGQLATDCLLDWPRRMSIAIGAAEGLVYLHHEANPHIIHRDIKASNVLLDTEFEAKVADFGFAKLIPEGVSHLTTRVKGTLGYLAPEYAMWGKVSGSCDVYSFGILLLEIVSAKKPIEKLPGGVKRDIVQWVTPHVQKGNFIHIADPKLKGHFDLEQLKSVVMIAMRCTDNSPEKRPTMQEVVEWLKGGIGRRKKEIPYLSYKTEDDKYEENYGEIRTTQSKFKIASDNDKLKIR 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g02283 365 Pfam Protein kinase domain 45 314 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma10g02283 365 SMART serkin_6 45 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma10g02283 365 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 5 341 - -
Gma10g02283 365 PANTHER OS01G0253100 PROTEIN 5 341 IPR045271 GO:0004714|GO:0006468
Gma10g02283 365 Gene3D Phosphorylase Kinase; domain 1 7 120 - -
Gma10g02283 365 ProSitePatterns Protein kinases ATP-binding region signature. 51 73 IPR017441 GO:0005524
Gma10g02283 365 Gene3D Transferase(Phosphotransferase) domain 1 121 326 - -
Gma10g02283 365 SUPERFAMILY Protein kinase-like (PK-like) 26 328 IPR011009 -
Gma10g02283 365 ProSiteProfiles Protein kinase domain profile. 45 330 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma10g02283 365 ProSitePatterns Serine/Threonine protein kinases active-site signature. 167 179 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g02283 Gma-Chr10 50429500 50431505 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g02283 26 343 Receptor kinase-like Gene Family AT5G45780 42.378 9.18e-82 258
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XV Gma10g02283 Pkinase 9.1e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g02283 - - gmx:100817283 748.429
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g02283 10 50429500 50431505 Gma10g02283 10 50429500 50431505 ECH
Gma10g02283 10 50429500 50431505 Gma20g01432 20 41438173 41439829 GST
Gma16g01645 16 37433194 37435624 Gma10g02283 10 50429500 50431505 PCT
Gma09g01437 09 38671448 38673558 Gma10g02283 10 50429500 50431505 PCT
Gma10g02283 10 50429500 50431505 Gma16g01645 16 37433194 37435624 PCT
Gma10g02283 10 50429500 50431505 Gma09g01437 09 38671448 38673558 PCT