Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g02277 ATGGGCAAGGAGTGGCATTGGAGTGGAAGGTCCTCCAAGAGAGGTGGAGGTGCTGAAACAGAAATCCCTTCCGGTTGCATGTGTGCAATGTTTCAGGCCTTTGATTTTCATCCTTTTCACTTTTCCATTAACCAGCAACAATCCTCTATCAAGTCTCGCACCCCAGAAGACCACACTGTCCTCAAAGGAGCAGAAGCACCAAGGAGTAGCTTGGAGTCGGAAACTGGTACTACAGTGTCATCGATTTCAAAAGAAGAAAATTTTAAAATACCAAAGAACATTCGAATCAAAACAAGAGGGAGCGGCACAAGATCAAGAACAGAAAGTTTTAGTGATCTTTCTTCAGAAATCAGTGCCTCTCCAGGGACCAAGACACCAACTTTGGTTGCAAGATTGATGGGTCTTGATCTTCTTCCTGATGCACATTCCTCTTCTTCCCCATCCCTTTCCACTCCGAACCTTCACAAACCACGGCAACACATCAAAATAATCAAACATAGAAACAGCACAGGCAGTAACACCTTGCCTGAGACTCCTAGAATGTCCTCTGGAAGAAGATCAGAAGTCGAGCATAGACTCTCTCTCCAAATCAACAAGGAGAACAACACAGTCCCCTTTGAGGATTTTGAGTCTCCTCGGTTTTCATTTTCAAAGAGGAAATATTATGAGAACAGTTGCAGGAGTCCAAGCCATTATGCTAGGCAAATTGTCAAACAAGTGAAAGAAAGTGTGAGCAGAAAGGTTGGATTAGACATCACCAACACTGTCAAAAACAGAGAACACGGAAGAGAAGAATCTGTAGGCCAATTCAAATTCAAGAAAACTCCTAAAACTTCAGTGAATGAATCCAGCCCTGGAAAACACTCAAACTCATCTTACTCCCCAAGGCTCAGCAGATTCATTGATACCAAACACAAACCAAGCACAACGccaccatcaccaactactccaaaaaaccaaaacacacactcaatactaaaaccaccatcaccaactacttcaaaaaatcaaaacccacactcaatactaaagccaccatcaccTCCTCCAGTAGTCAACATTGAAACACAGCTTTCAAGAGTTTTAACAAAGCCAAAGCCTCAAGCATTGCCTGAGAATGATTGGCAGAACCAAAAATCAGCCACAAAAGGCAAGAACACTAGCAGTGGAAAGTTGAGTTCCCGGGTCAACAAGCCTCCACAGACATCAATCAGAAACAAGCAAGAAGAGTCATTTATTACTCGTCCTCCATCAGCCACTAAAGCCAATGACATCAAAACCAAAAGCAAGAGAACTCATCCACTTTCAAGCAATCTTCTTAATAACCTCAACACGGTTCCAAATCTTCTCCCTGTCAAGACAAGACCTTCTCCTCAAAAACAGTCACAGGTACGTGATGGTGATGATGATGCTCGAGATGCAAAACGCAGCGCACAGTTATTTAGTAGTTCGGGCCTTTCGTACAAACAAGAAGCGCCACGACCACACTCACCCCGAGGAGGAACCACCAGCAGCGATGACGACAAATCTCACGGCACCTCCGCCACCACCACCGGCGCAGACGACGACGACGAAGGACCAGAATATCAGTACATCACAACCATCCTAACCCGTAGTACTACCACCACTGGGCCCCACAACAGCAACCTACCCCACCTCCAGTTTCAGTGGTTCTCTCCGACACACCCCTTGGACCCTTCCGTATTTCACCGTCTCGAGCACTACACAACATCCAATTCCTTTGTTTCCTTCCCCAGCGACAACAAAGATTGCATCTTTAAGCGGAAACAACATCTGGGTCCGCGCTGCAACCGTAGATTACTGTTCGATTTGGTCGATGAGTTGCTGTCGGAGATTCTTGTTCGGCCGAGGCGTTACAAAGGGGCGTTGTTGGAGACAGTGTGGGAGAGGGTTCGGAGTTTCCCACGTGCGAAGTGCGAGGTTTTGGAGGATATTGATGCGTTGATTGAGATGGAAGAGATGAAGAAAGATGAGGAAGGGGAAGGGTTGGTGAAGGAGATTGAGAGGAGCATGTTTGAGACGTTGGTGCATGAAACGTTTACCGTTATGGTTGGTGGCGTGGATACGAAGGGAAAGTGTTAA 2103 0.4375 MGKEWHWSGRSSKRGGGAETEIPSGCMCAMFQAFDFHPFHFSINQQQSSIKSRTPEDHTVLKGAEAPRSSLESETGTTVSSISKEENFKIPKNIRIKTRGSGTRSRTESFSDLSSEISASPGTKTPTLVARLMGLDLLPDAHSSSSPSLSTPNLHKPRQHIKIIKHRNSTGSNTLPETPRMSSGRRSEVEHRLSLQINKENNTVPFEDFESPRFSFSKRKYYENSCRSPSHYARQIVKQVKESVSRKVGLDITNTVKNREHGREESVGQFKFKKTPKTSVNESSPGKHSNSSYSPRLSRFIDTKHKPSTTPPSPTTPKNQNTHSILKPPSPTTSKNQNPHSILKPPSPPPVVNIETQLSRVLTKPKPQALPENDWQNQKSATKGKNTSSGKLSSRVNKPPQTSIRNKQEESFITRPPSATKANDIKTKSKRTHPLSSNLLNNLNTVPNLLPVKTRPSPQKQSQVRDGDDDARDAKRSAQLFSSSGLSYKQEAPRPHSPRGGTTSSDDDKSHGTSATTTGADDDDEGPEYQYITTILTRSTTTTGPHNSNLPHLQFQWFSPTHPLDPSVFHRLEHYTTSNSFVSFPSDNKDCIFKRKQHLGPRCNRRLLFDLVDELLSEILVRPRRYKGALLETVWERVRSFPRAKCEVLEDIDALIEMEEMKKDEEGEGLVKEIERSMFETLVHETFTVMVGGVDTKGKC 700
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g02277 700 Pfam DUF761-associated sequence motif 114 144 IPR032795 -
Gma10g02277 700 MobiDBLite consensus disorder prediction 370 423 - -
Gma10g02277 700 MobiDBLite consensus disorder prediction 1 20 - -
Gma10g02277 700 PANTHER DUF4378 DOMAIN PROTEIN 1 700 - -
Gma10g02277 700 MobiDBLite consensus disorder prediction 97 124 - -
Gma10g02277 700 MobiDBLite consensus disorder prediction 462 476 - -
Gma10g02277 700 MobiDBLite consensus disorder prediction 272 341 - -
Gma10g02277 700 MobiDBLite consensus disorder prediction 255 271 - -
Gma10g02277 700 MobiDBLite consensus disorder prediction 365 527 - -
Gma10g02277 700 PANTHER LOW PROTEIN: M-PHASE INDUCER PHOSPHATASE-LIKE PROTEIN 1 700 - -
Gma10g02277 700 MobiDBLite consensus disorder prediction 255 352 - -
Gma10g02277 700 MobiDBLite consensus disorder prediction 47 83 - -
Gma10g02277 700 MobiDBLite consensus disorder prediction 98 124 - -
Gma10g02277 700 MobiDBLite consensus disorder prediction 432 461 - -
Gma10g02277 700 Pfam Domain of unknown function (DUF4378) 528 685 IPR025486 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g02277 Gma-Chr10 50355971 50359265 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g02277 94 688 TRM (TON1 Recruiting Motif) Superfamily AT5G62170 32.870 1.22e-50 184
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g02277 - - gmx:102659931 1317.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g02277 10 50355971 50359265 Gma10g02277 10 50355971 50359265 ECH
Gma10g02277 10 50355971 50359265 Gma20g01439 20 41537435 41541678 GST
Gma16g01637 16 37307523 37310850 Gma10g02277 10 50355971 50359265 PCT
Gma09g01425 09 38455551 38460325 Gma10g02277 10 50355971 50359265 PCT
Gma10g02277 10 50355971 50359265 Gma16g01637 16 37307523 37310850 PCT
Gma10g02277 10 50355971 50359265 Gma09g01425 09 38455551 38460325 PCT