Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g02273 ATGGAAGTCAATCCCACCCACGACGGTGGCGATGACACCTCGGAAACGCCACTGCCGCCAATGGTGGACCCATCTCCGTCTCCGTCTCCGCAAATGAAAGAAGAGGTGATGGACGCGGAGCAAGGCGGTGACGTATCGCTTCCAATGAGCGTTGTTCCGGCGTCGTTGACAGTGTCAACTGAGGCAGcggcgaaacgatcgtcgaaggaccggcacacgaaggtggagggacgcggccggagaatccgtatgccggcgacgtgcgcggcgaggatctttcagctgacgcgggaactgggacacaagtccgacggAGAAACAATCCGGTGGTTGCTGGAGCACGCAGAGCCGGCGATCATCGAGGCCACCGGAACCGGCACCATACCGGCGATCGCGGTCTCGGTCGGCGGCACACTCAAGATTCCGACATCCTCGGAAGCGAGAGCCCAGGGAGAAGAAGACACTCCGAAAAAGCGAAGGAGAAGAGCATTAAAGAGCGAATTCATCAACCTGAACGAAAACCAGGTTTCGGTGTCTTCAGGGCTGGCACCAATCGCACAAAGCAGCGCATATGGAAGTGGTGGTGGTGGACTTGTTCCTCTGTGGCATGGTAACGGTGCTGCTGCTGGGCCTTTCTTCGTGTTTCCGAACGCTTCAAACCCACCTCAGTATTGGGCCATTCCGGCAACCGCGGCCCCGTTTTTCAACGTCCAGGCCCGGCCCATTTCGGGGTTCGTTTCCGCCTTGCAGATGCAACATGATAACCACCACCACTCTTTAATAAACGCTGCTGCCTCGGGTTCTGTTAAATCTTCGTCCACTGTGAGTGTCACTAGCAGTGCTGCTTCCACTCAAATGCTCAAGGATTTCTCCTTCGAAATTTATGACAAGAAAGAGCTTCAATTTTTAGGTCAACCACCACAACCCTCTTCATAG 936 0.4701 MEVNPTHDGGDDTSETPLPPMVDPSPSPSPQMKEEVMDAEQGGDVSLPMSVVPASLTVSTEAAAKRSSKDRHTKVEGRGRRIRMPATCAARIFQLTRELGHKSDGETIRWLLEHAEPAIIEATGTGTIPAIAVSVGGTLKIPTSSEARAQGEEDTPKKRRRRALKSEFINLNENQVSVSSGLAPIAQSSAYGSGGGGLVPLWHGNGAAAGPFFVFPNASNPPQYWAIPATAAPFFNVQARPISGFVSALQMQHDNHHHSLINAAASGSVKSSSTVSVTSSAASTQMLKDFSFEIYDKKELQFLGQPPQPSS 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g02273 311 MobiDBLite consensus disorder prediction 1 47 - -
Gma10g02273 311 MobiDBLite consensus disorder prediction 59 78 - -
Gma10g02273 311 Pfam TCP family transcription factor 67 153 IPR017887 -
Gma10g02273 311 PANTHER TCP FAMILY TRANSCRIPTION FACTOR 47 309 - -
Gma10g02273 311 ProSiteProfiles TCP domain profile. 68 122 IPR017887 -
Gma10g02273 311 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 47 309 IPR005333 GO:0003700
Gma10g02273 311 MobiDBLite consensus disorder prediction 64 78 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g02273 Gma-Chr10 50323744 50325376 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g02273 16 303 TCP Transcription Factor Family AT5G51910 51.495 2.21e-76 234
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Gma10g02273 TCP 2.2e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g02273 - - gmx:100816220 550.821
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g02273 10 50323744 50325376 Gma10g02273 10 50323744 50325376 ECH
Gma10g02273 10 50323744 50325376 Gma20g01442 20 41581527 41582835 GST