Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g02268 ATGACTAGGTTATCTGGGCACCCAAATGTTGTAGATCTCAAGGCAGTTTATGAAGAAGAGGATTTTGTTCATCTAGTGATGGAGCTTTGTGCTGGAGGAGAGTTGTTTCATCTGTTAGAAAAGCACGGATGGTTTTCTGAATTTGAAGCCAGGGGTCTTTTTAGGCATCTCATGCAGATGGTTTTGTATTGTCATGAAAACGAGGTTGTTCATAGAGATTTGAAGCCTGAGAACATTCTCTTGGCAACTAGATCTTCCTCATCTCCAATTAAATTGGCAGACTTTGGGCTTGCAACCTACATAAAGCCCGCTCCAGAGGTACTGGCAGGTGCATATAACCAGGCTGCTGATGTTTGGAGTGCAGGGGTTATTCTTTACATTCTACTGAGTGGGATGCCTCCATTTTGGGGAAAGACAAAGTCAGGAATATTTGAAGTTGCTAAGACTGCTAACCTGAGAGAATCTTCTCAAAGGCTCACTTCCAAGGAGGTTTTGGATCATCACTGGATGGAAAGCAACCAAACAAATCCTGAACAACTAAGTGAACATAAAATTAGAGGTTGTGGAGAGTTGGATGTTGGTAGCAATTCATTCTCTACCTCGTTTATGTCCAGGAATAAGGACATCAGCTTTGGCGCTGAATCTCCTACATGTGGTCCTCAATTGCCTACGTTCACATGCAAATCATCATTTTCTTCCTTTTTTGAGGAACCAGTGAAACCTTGTTCTGTTTCGGGTGGATTTTCATTTCAAAGCTCAGGTGGTTCCACCGATTTGGAATTTTCTTCTACTATTCCCTCAATGCCTAGCTTTGCATTTCTCAGCTCCAGTTCTGTTGTTGAGCAAAGGGTTTGTATTTCAGAATGCCTAACTAACACGTCAAATGTAAATGCAATTGCTGGAGATTCTCCCCTTTGCTTTGGACATGATGTTAAAGAGTTGGATTGCAAGCCTGTAGAGGGTAAAAGGGCAGGTGGAACAATTGGTCTTGGGGCATTTGGGTTCCACAACAAGAGAAACCAGACAATTGGACTTGGTGAGTGTGAGCAACTTGATCTTGTGGTGACTGAATCTGTCATTCGTTGGTCATCATGCACCCAACTTCCTACATCACCAAGATCATCTCTCGTCTGTTGA 1137 0.4274 MTRLSGHPNVVDLKAVYEEEDFVHLVMELCAGGELFHLLEKHGWFSEFEARGLFRHLMQMVLYCHENEVVHRDLKPENILLATRSSSSPIKLADFGLATYIKPAPEVLAGAYNQAADVWSAGVILYILLSGMPPFWGKTKSGIFEVAKTANLRESSQRLTSKEVLDHHWMESNQTNPEQLSEHKIRGCGELDVGSNSFSTSFMSRNKDISFGAESPTCGPQLPTFTCKSSFSSFFEEPVKPCSVSGGFSFQSSGGSTDLEFSSTIPSMPSFAFLSSSSVVEQRVCISECLTNTSNVNAIAGDSPLCFGHDVKELDCKPVEGKRAGGTIGLGAFGFHNKRNQTIGLGECEQLDLVVTESVIRWSSCTQLPTSPRSSLVC 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g02268 378 ProSitePatterns Serine/Threonine protein kinases active-site signature. 69 81 IPR008271 GO:0004672|GO:0006468
Gma10g02268 378 Gene3D Transferase(Phosphotransferase) domain 1 1 209 - -
Gma10g02268 378 SUPERFAMILY Protein kinase-like (PK-like) 2 255 IPR011009 -
Gma10g02268 378 PANTHER CALCIUM-DEPENDENT PROTEIN KINASE 34-LIKE 155 374 - -
Gma10g02268 378 PANTHER SERINE/THREONINE-PROTEIN KINASE 155 374 - -
Gma10g02268 378 PANTHER SERINE/THREONINE-PROTEIN KINASE 1 154 - -
Gma10g02268 378 ProSiteProfiles Protein kinase domain profile. 1 186 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma10g02268 378 PANTHER CALCIUM-DEPENDENT PROTEIN KINASE 34-LIKE 1 154 - -
Gma10g02268 378 Pfam Protein kinase domain 2 161 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma10g02268 378 SMART serkin_6 1 170 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g02268 Gma-Chr10 50267480 50272062 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g02268 1 178 EF-hand Containing Proteins AT5G12180 41.395 1.98e-49 172
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Gma10g02268 Pkinase 1.6e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g02268 - - gmx:100776088 551.206
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g02268 10 50267480 50272062 Gma10g02268 10 50267480 50272062 ECH