Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g02266 ATGTTTTCCATCAATCATTTCTCCGCCCCAGATGCGAACTCGCCGGGGTCGGGGTCAGGAACTTCCCGACCGGTACCGGCGCTGTCGGACGAGGATTATTTTCTGGCGGCGAGCAATCCCAAGAAACGCGCCGGGAGGAAGAAGTTCCGGGAGACGCGCCACCCGGTGTACCGCGGCGTGAGGAGGAGGGACTCAGGCAAGTGGGTGTGCGAGGTGCGCGAGCCCAACAAGAAGTCCAGGATTTGGCTCGGGACCTTTCCCACGGCGGAGATGGCGGCGCGTGCGCACGACGTGGCGGCGCTCGCGCTGAGGGGAAGGTCCGCTTGCCTCAACTTCGCCGACTCCGCGTCGCGTCTCCCGGTGCCGGCGACGGCGGAGGCCAGGGACATTCAGAAGGCGGCGGCGGAGGCCGCGGAGGCATTTCGCCCGGGGAAGGATGATGGTGCGGTGGTGGCGACGGCGACGGAGCGTGAAGAAGAAGAAGAAAAGGTTGTACCAGAGTATCTGAGGAACATGGTGCTCATGTCGCCGACGCATTGCTTCGGGAGTGATGAATATGGAAGCGCTGACGTGGAATTCGACGATGCTGAAGTTCGGTTGTGGAGTTACTCCATTTAA 618 0.623 MFSINHFSAPDANSPGSGSGTSRPVPALSDEDYFLAASNPKKRAGRKKFRETRHPVYRGVRRRDSGKWVCEVREPNKKSRIWLGTFPTAEMAARAHDVAALALRGRSACLNFADSASRLPVPATAEARDIQKAAAEAAEAFRPGKDDGAVVATATEREEEEEKVVPEYLRNMVLMSPTHCFGSDEYGSADVEFDDAEVRLWSYSI 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g02266 205 MobiDBLite consensus disorder prediction 1 24 - -
Gma10g02266 205 SMART rav1_2 56 119 IPR001471 GO:0003700|GO:0006355
Gma10g02266 205 Pfam AP2 domain 55 105 IPR001471 GO:0003700|GO:0006355
Gma10g02266 205 MobiDBLite consensus disorder prediction 1 26 - -
Gma10g02266 205 Gene3D AP2/ERF domain 56 114 IPR036955 GO:0003700|GO:0006355
Gma10g02266 205 ProSiteProfiles AP2/ERF domain profile. 56 113 IPR001471 GO:0003700|GO:0006355
Gma10g02266 205 PRINTS Ethylene responsive element binding protein signature 57 68 IPR001471 GO:0003700|GO:0006355
Gma10g02266 205 PRINTS Ethylene responsive element binding protein signature 79 95 IPR001471 GO:0003700|GO:0006355
Gma10g02266 205 CDD AP2 57 115 IPR001471 GO:0003700|GO:0006355
Gma10g02266 205 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 1D 17 205 IPR045277 GO:0003700
Gma10g02266 205 PANTHER CBF/DREB1 TRANSCRIPTION FACTOR 17 205 - -
Gma10g02266 205 SUPERFAMILY DNA-binding domain 56 115 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g02266 Gma-Chr10 50254896 50255869 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g02266 2 142 AP2-EREBP Transcription Factor Family AT5G51990 69.504 1.90e-60 187
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Gma10g02266 AP2 1.2e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g02266 - - gmx:100797582 370.933
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g02266 10 50254896 50255869 Gma10g02266 10 50254896 50255869 ECH
Gma10g02266 10 50254896 50255869 Gma20g01450 20 41629902 41631058 GST
Gma16g01625 16 37197625 37198766 Gma10g02266 10 50254896 50255869 PCT
Gma09g01413 09 38194831 38196070 Gma10g02266 10 50254896 50255869 PCT
Gma10g02266 10 50254896 50255869 Gma16g01625 16 37197625 37198766 PCT
Gma10g02266 10 50254896 50255869 Gma09g01413 09 38194831 38196070 PCT