Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g02265 ATGGATGGCAACTCTTTTGGAAACGTGCCACCCCCACCAATACAAGTTCCTGATAACTTGGCTATCTCCTCCTCCTCTTCGCCAACTCCCACGACATCATCTCCGTCTCCGACACCCTCTGGAGGCTTTCGGTACCGCGGGACGCGGTGCCGGAGCGGAAAGTGGGTGTCGGAGATAAGGGAGCCACGTAAAACGAATCGCATTTGGCTGGGGACTTACCCGACAGCGGAAATGGCTGCGGCGGCATATGATGTCGCCGCACTCGCGTTGAAGGGTCCCGACACGCCCGTCAACTTCCCTAATTCGATACTGTCGTACCCTATTCCTGCTTCATTGTCCTCCACGGACATTCGCGCCGCGGCTGCGGCCGCGGCGCAGGCTAGGATCGTGAGGGCGCCGCAGGAGAGTGAGGAAACGGTAAACCCTGATGATGGCGGGCAAGGGTTATCGGAGAGGCGTGAGGAGTACATTGATGAGGATGAGTTGTTGAACATGCCGAATTTGCTCGATGAAATGGCCAGAGGAATGCAGAAGGTCTTACCTGTTGAACTTTGCTGA 558 0.5663 MDGNSFGNVPPPPIQVPDNLAISSSSSPTPTTSSPSPTPSGGFRYRGTRCRSGKWVSEIREPRKTNRIWLGTYPTAEMAAAAYDVAALALKGPDTPVNFPNSILSYPIPASLSSTDIRAAAAAAAQARIVRAPQESEETVNPDDGGQGLSERREEYIDEDELLNMPNLLDEMARGMQKVLPVELC 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g02265 185 Pfam AP2 domain 50 92 IPR001471 GO:0003700|GO:0006355
Gma10g02265 185 ProSiteProfiles AP2/ERF domain profile. 44 100 IPR001471 GO:0003700|GO:0006355
Gma10g02265 185 SUPERFAMILY DNA-binding domain 45 102 IPR016177 GO:0003677
Gma10g02265 185 MobiDBLite consensus disorder prediction 1 47 - -
Gma10g02265 185 CDD AP2 44 102 IPR001471 GO:0003700|GO:0006355
Gma10g02265 185 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF026 32 177 - -
Gma10g02265 185 MobiDBLite consensus disorder prediction 18 41 - -
Gma10g02265 185 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 32 177 - -
Gma10g02265 185 Gene3D AP2/ERF domain 43 102 IPR036955 GO:0003700|GO:0006355
Gma10g02265 185 SMART rav1_2 44 106 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g02265 Gma-Chr10 50238036 50242804 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g02265 45 176 AP2-EREBP Transcription Factor Family AT5G52020 53.333 6.66e-35 120
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Gma10g02265 AP2 1.3e-09 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g02265 - - gmx:100813560 318.161