Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g02264 ATGGAGTCCATGACGGTGATTAAATCAACCTTCCCAATTTTCATGACCAATAACGCCCCATTTTCCCTCTCCACAAGACCTCTTAGACCCATCCTGAAGGTTTCCGTGAAACCCCCACCTCCAGATTTCGATTACAGGCGAGAGATATCGGAGGAGTCAAGAGCCGCCATAGCCGAATCTCACCCGGAGTTGCTTGACCTGGCTGACAATGGGAGCTTGGTTTTGGTTCAGAAGAAGAGGTTCGGTCCTGTCCCTTCTTGGAGGACCGAATTCGTCGAACCTGAATCCATTTGGTTGATTGGAACCACCCATGTTTCTGAGGTTTCCGCTGTGGAGGTGGAACGCGTGGTGCGTGCTCTGAGGCCAGATAATGTCGTTGTTGAGCTCTGCAGAAGCAGAGCTGGGATCATGTATGCTACTGCCAATGATGAGCTTGGCAAACAACTGCGTTCTAATATGTTTTCCTTGAGTGGCACTGGCTTTTTTGGAGCTGTTGGTCGTAGCATAAACCTAGGTAAGTTCATAGTTTTTTTACATGTGTGTTATAATATCTATAAAAGAAACCTATTTATTATTTTTCTAAATATATCAGGTGGTCAAACTGCTTTAGCATTACGATTACTTTTGGCTACTTTTTCATCGAAGATCTCTTCAGATATTAATCGCCCTTTTGGTGATGAGTTTCGTGCTGCTCGGAAAGCTTCTGAGGAAATTGGTGCACAAATAGTTTTAGGAGATCGGCCAATTGAAATAACGCTTCAAAGAGCATGGAAGGCTATGAAATGGACTCAGAAACTAAGTTTAGTGTTATCAATTATTCGGGGGATAGCATCTTCATCTAACAGTTCTATAAATAAGCTCAAGGAAGCAAGTTCAGATGATGGTACATTTCAACTTTATGAGCAATTGAGTTTTTCATATCCTTCTTTATTGCCACCTCTCATACATGAACGAGATACTTATCTTGCATGGTCATTGAAGCGGAGCAAAGCTGTGAATAACAGTAAAAATGTTGTGGGTGTCATTGGAAAAGGCCATATGAACGGTGTAATATATGCATTGTTATCCGACACGGGAAATTTGAGGGTTCCAACTTCAAACCCAACAGCACTTATCGTTCTCATGCAACAAGGGAAAATGAGGCCTATTTTCTGTGGAAATTTTGAATATGATGCCCGGCAGTCAGAGCTGGAGCGGCTTTTTAGACGATATGGGAAGGTTGATAGGGTGGATATGAAGTCTGGATTTGCTTTTATCTATATGGAAGACGAGAGAGATGCTGAGGCTGCAATTCGTGCTCTTGATCGAGTAGAATTTGGTCGGAAGGGACGCAGACTCCGTGTGGAATGGACAAAGCATGAACGTGGTGTTAGAAGGCCTGCTAGTTCAAGAAGATCTTCAGCTATTGGGAGGCCATCAAAGACCTTGTTTGTAATTAATTTTGATACATACCATACCAGAACAAGGGACTTGGAGAGGCACTTTGAACCATATGGAAAGATTGTCAGTGTGAGGATCAGAAGGAATTTTGCTTTTGTTCAATATGAATCAGAGGATGATGCTAGCAGAGCACTGGAAGCTACAAATATGAGCAAGTTACTGGATCGAGTTATTTCTGTCGAGTTTGCTGTTAAAGATGATGATGATAGGAGAAATGGATATAGCCCTGAGAGAGGCCGTGATCGTCAACGTGATAGAAGCCGTGATGGAAGGCGATCAcccagtccttatcgtaaagaaaggggtagtcctgattatggtcgtgggcccagtccatatcagagagagaggggtagccctgactatggccgtgACCGTAGCCGTAGCAGAAGCCCCCCTAGGAGGGAGAGAGCTAGCCCTGCTTATGGACGTAGAAGCATTAGTCCATATAGAAGAGAAAGGGAGGGTTCTGAACCTGTTCGTGACTCCAGCCGCAGTCCTTATCACAAAGAGCGAGGGAGAACTGACCATGGCATTTCTCCTTCGCAGAGTCCTGAAGGAAGAGGGAGGAAAAGCCCCCAAAATGGTCACGGTTCTAGCCGTAGTCCTCGTGATACTGGGAAGACTAGCCCTGAAAATGGACATGGCTCTGGAAGTCCTGATGAAAAAGGGAATCCCAGCCCTTACAATGGTTATGGAGGGAGCCCAAATACTGTGCCTGATCCCAGGGACAGTCCCAACTATGGTGGTCCTGAAAGTCCCATGCATGAAAGATACCACAGCCAGTCACCCCCTGCAGAAGAATGA 2247 0.429 MESMTVIKSTFPIFMTNNAPFSLSTRPLRPILKVSVKPPPPDFDYRREISEESRAAIAESHPELLDLADNGSLVLVQKKRFGPVPSWRTEFVEPESIWLIGTTHVSEVSAVEVERVVRALRPDNVVVELCRSRAGIMYATANDELGKQLRSNMFSLSGTGFFGAVGRSINLGKFIVFLHVCYNIYKRNLFIIFLNISGGQTALALRLLLATFSSKISSDINRPFGDEFRAARKASEEIGAQIVLGDRPIEITLQRAWKAMKWTQKLSLVLSIIRGIASSSNSSINKLKEASSDDGTFQLYEQLSFSYPSLLPPLIHERDTYLAWSLKRSKAVNNSKNVVGVIGKGHMNGVIYALLSDTGNLRVPTSNPTALIVLMQQGKMRPIFCGNFEYDARQSELERLFRRYGKVDRVDMKSGFAFIYMEDERDAEAAIRALDRVEFGRKGRRLRVEWTKHERGVRRPASSRRSSAIGRPSKTLFVINFDTYHTRTRDLERHFEPYGKIVSVRIRRNFAFVQYESEDDASRALEATNMSKLLDRVISVEFAVKDDDDRRNGYSPERGRDRQRDRSRDGRRSPSPYRKERGSPDYGRGPSPYQRERGSPDYGRDRSRSRSPPRRERASPAYGRRSISPYRREREGSEPVRDSSRSPYHKERGRTDHGISPSQSPEGRGRKSPQNGHGSSRSPRDTGKTSPENGHGSGSPDEKGNPSPYNGYGGSPNTVPDPRDSPNYGGPESPMHERYHSQSPPAEE 748
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g02264 748 CDD RRM2_AtRSp31_like 475 544 - -
Gma10g02264 748 Gene3D - 465 556 IPR012677 -
Gma10g02264 748 Gene3D - 375 464 IPR012677 -
Gma10g02264 748 SUPERFAMILY RNA-binding domain, RBD 381 548 IPR035979 GO:0003676
Gma10g02264 748 MobiDBLite consensus disorder prediction 598 657 - -
Gma10g02264 748 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 474 545 IPR000504 GO:0003723
Gma10g02264 748 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 381 453 IPR000504 GO:0003723
Gma10g02264 748 PANTHER TRAB DOMAIN-CONTAINING PROTEIN 34 364 - -
Gma10g02264 748 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 476 538 IPR000504 GO:0003723
Gma10g02264 748 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 383 441 IPR000504 GO:0003723
Gma10g02264 748 Pfam TraB/PrgY/gumN family 87 149 IPR002816 -
Gma10g02264 748 Pfam TraB/PrgY/gumN family 219 350 IPR002816 -
Gma10g02264 748 PANTHER PHEROMONE SHUTDOWN PROTEIN 34 364 IPR046345 -
Gma10g02264 748 MobiDBLite consensus disorder prediction 658 696 - -
Gma10g02264 748 MobiDBLite consensus disorder prediction 547 585 - -
Gma10g02264 748 CDD RRM1_AtRSp31_like 381 452 - -
Gma10g02264 748 CDD TraB_PrgY-like 97 354 IPR046345 -
Gma10g02264 748 MobiDBLite consensus disorder prediction 547 748 - -
Gma10g02264 748 SMART rrm1_1 475 541 IPR000504 GO:0003723
Gma10g02264 748 SMART rrm1_1 382 449 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g02264 Gma-Chr10 50215851 50225819 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g02264 383 540 Eukaryotic Initiation Factors Gene Family AT4G34110 24.277 2.25e-08 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g02264 K12893 - gmx:100796509 699.123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g02264 10 50215851 50225819 Gma10g02264 10 50215851 50225819 ECH