Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g02258 ATGGATGGGGATCAAAACGAGTTGGGTACTGTGGGTGAAGGGAATGTTGATATTGGACCTCAGACGTTGAATAACTTGGACTTGAATGTGGAGCAGAACTGTTGCAGCTCAAATGTTGCTCACGCTAGTGACACTCAATCCTGTCATCCTTCTTCAGCAAATGTACTTAGCGGTGATACTGTATTGGGAATTGGTACGGAATTTGAGTCCGATGATCATGCATACCAATTCTATAACAAGTATGCCAGATTGTTGGGTTTCAATGTTAGAAAAGATTGGATAAATAGGAGTAAGGTGCATGGTCAAGTGGTGTCTAGGAAGTTTACTTGCTCCAAAGAGGGATATCGCAGGAAAGACAAAAGAGATGCTAATGTGAAGAAACATAGGAAGGAAACGAGATCTGGCTGCTTGGCACATATGATTGTCACTCGGCAACCAGATGGTAAATACCAGGTCACCCATTTTGAAGCGCAACATAATCATGACAATATAAACTCTAACTCTAACAGTGCTAACATGTTAAACTTGCAAAATGAATTTAGTGTTGCTCAAGCTGTGGAAGCTGACTCAAACAATAGTTTGGGACCTAAATCAAAGTCAGCACTAGATGTGTTGAATAAAAAAACAAGTGCCCGTGAATCTCTTGATCTACTTTCAATGAATTATGATAATTACCTTCATTATGCGagggaaagagatatgaaggaaggagaagcagggcgtttgcttggttacttccaaaggcaacactttgaaaatccaacatttttttatgccatacagcttgatgttgatgacaaggttagcaatattttttgggctgatgacaatatggtggtggattatgaacattttggtgatgtaatttgtttggatacaacttgcagaacaaacaaagatcttcggccatttgtacagtttttaggtattaaccatcacagacaagtgttaatctttgctgctgcttttctgtatgacgattccattgaatcatataattggctatttcgaactttcattagtgcaatgtctgggaaaaagccaaagaccattctcacagaacaagaagctgtaattattgaagccatcaatacggttttatctcacacaaaccattgtacatgtgtatggcagttgtatgagaacactttgaaacacctcagccatgttgttaaagatgctgaatcttttgcaaacgatctaaggagaagtatttatgaccccaaggatgaggaagaatttactcatgcttgggaggctatgctggagaagtataatctccagcaaaatgaatggctgagatggatttatagagaaagagagaaatgggctgttgtctttggtcagaatacattttttgtagacatcaaaggctttcatttaggtgagattttgtctaaaaaatttagaaattatctaaatcctgaccttgatgtgcttcaattttttaagcattttgaaagggtagtagatgagcagcgttacaaagaAATAGAAGCTAGTGAGGAAATGAGCAGGTGTTTGCCAAGGCTAATGGGTAATGTGGTTTTGTTGAAGCATGCAAGTGATATTTATACTCCAAGAACATTTGAAGTATTTCAGCGAGCATACGAGAAGTCTTTAAATGTTCTTGTTAACCAACACAGTAGAAATGGATCATTGTTTGAGTACAAAGCAAATACATTTGGGCATACTAGACaatacaatgtcaccttcaattcttctgatgacacagttgtctgcagttgtatgaagtttgagcgtgttggtattctgtgtagccatgcactaaaagttcttgatcatagaaacataaaagtagttccatctcggtacatcttggatagatggacaggacatgcaaggttgggaaatcttagggagattaggcaatgtaaaatgcaaaataatcctaacatggttgtcacaagctgttacaaagatttgtgCAACAGACTGCTCAAGTTATCAGCAAGAGCCTCTGAATCTATGGAGGCTTATCAGTTTGCCGCAAGGCAACTTGATGAAGTGATGATAGGAGTGGAGAAAATCTTGACATTAAAAGTTGAGCAACGTCAAGTTATCACCTCAAGTAATATTGATGCAAATGCTTCAGAAAATGAGCCTGCAGAGATCTTTCTGAATGGACATTCAATTGAGGATCAGGATGAAAGTAACAGAGCAAATGGAGGAAAAGACAGGAGAGCTACATCAGATAGGGGCTATCTAACAACCATGACTTGTAATGGAGCTGATTCTGATAGGATTTTGAATGTAGAAGTATCTCCACCAAATACCGTTGTATGCATTTCAAGCCCCTCGTCTGCATATGTTTCATCTCATTCTGCAACACCAAATCCCATTCTGCAGGGTTTGTACGGTTTTGAAGCCAATCAAGTGGTTCACTGCATGTATGAACAGACTAATCATGTGCTCGACCATCAATCTAATTCTAACACCTTACAAACACCAAACATCTTTTCTAACCAACAGGATTCTCCTGGTCAATCTCAGCTGCTGCAGGAGCCTATAATCCAGAGCACATACCATGCGTCCATGCTCAGCAATAATCAGATGTGA 2580 0.2384 MDGDQNELGTVGEGNVDIGPQTLNNLDLNVEQNCCSSNVAHASDTQSCHPSSANVLSGDTVLGIGTEFESDDHAYQFYNKYARLLGFNVRKDWINRSKVHGQVVSRKFTCSKEGYRRKDKRDANVKKHRKETRSGCLAHMIVTRQPDGKYQVTHFEAQHNHDNINSNSNSANMLNLQNEFSVAQAVEADSNNSLGPKSKSALDVLNKKTSARESLDLLSMNYDNYLHYARERDMKEGEAGRLLGYFQRQHFENPTFFYAIQLDVDDKVSNIFWADDNMVVDYEHFGDVICLDTTCRTNKDLRPFVQFLGINHHRQVLIFAAAFLYDDSIESYNWLFRTFISAMSGKKPKTILTEQEAVIIEAINTVLSHTNHCTCVWQLYENTLKHLSHVVKDAESFANDLRRSIYDPKDEEEFTHAWEAMLEKYNLQQNEWLRWIYREREKWAVVFGQNTFFVDIKGFHLGEILSKKFRNYLNPDLDVLQFFKHFERVVDEQRYKEIEASEEMSRCLPRLMGNVVLLKHASDIYTPRTFEVFQRAYEKSLNVLVNQHSRNGSLFEYKANTFGHTRQYNVTFNSSDDTVVCSCMKFERVGILCSHALKVLDHRNIKVVPSRYILDRWTGHARLGNLREIRQCKMQNNPNMVVTSCYKDLCNRLLKLSARASESMEAYQFAARQLDEVMIGVEKILTLKVEQRQVITSSNIDANASENEPAEIFLNGHSIEDQDESNRANGGKDRRATSDRGYLTTMTCNGADSDRILNVEVSPPNTVVCISSPSSAYVSSHSATPNPILQGLYGFEANQVVHCMYEQTNHVLDHQSNSNTLQTPNIFSNQQDSPGQSQLLQEPIIQSTYHASMLSNNQM 859
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g02258 859 PANTHER PROTEIN FAR1-RELATED SEQUENCE 12-LIKE 9 752 - -
Gma10g02258 859 SMART 26again6 579 606 IPR006564 GO:0008270
Gma10g02258 859 ProSiteProfiles Zinc finger SWIM-type profile. 568 604 IPR007527 GO:0008270
Gma10g02258 859 MobiDBLite consensus disorder prediction 717 738 - -
Gma10g02258 859 Pfam FAR1 DNA-binding domain 76 162 IPR004330 -
Gma10g02258 859 Pfam MULE transposase domain 288 382 IPR018289 -
Gma10g02258 859 MobiDBLite consensus disorder prediction 716 738 - -
Gma10g02258 859 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 9 752 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g02258 Gma-Chr10 50132011 50136066 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Gma10g02258 MULE 5.7e-22 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g02258 - K17604 gmx:100809803 1712.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g02258 10 50132011 50136066 Gma20g01461 20 41741482 41742607 GST