Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g02257 ATGGGCTTTCTCCGGCGACTTTTCGGCGCCAAAAAACCCTCCGATTGCAAATCCGGCAAGAAAAGATGGACCTTCCTCAAACACACCGTCAGAAACAAGTCACTCCCGCCGCCACCGATACCCCCCGCACTCAACACTCACTTTGATTCCTCAACTCCCTTGGATGCCAACAAGCATGCAATCGCCGTCGCCGCCGCCACCGCCGCAGTAGCAGAAGCTGCTCTCGCCGCCGCCCACGCCGCTGCCGAGGTAGTCAGACTCACAAGCGGCGGCGTCGCCGCCACAAGTACCAGCTCCAGAACCGCTGTCACGGCGGCGCGTGTTGGCAACCTTGAGACCGCCGCCGTTAGGATACAATCGGCGTTCCGTGGTTACTTGGCAAGGAGGGCATTGAGAGCGCTTAAAGCATTGGTGAAGTTGCAAGCATTGGTTAGGGGCCACATTGTGAGAAAGCAAAGTGCAGATATGCTGAGGCGCATGCAAACATTGGTGCGACTTCAGGCCCAGGCACGTGCAAGCCGTGCGCACTTGTCAGATAATACGCCTTCTTTCAACTTCAACTCTTCCCTACTTTCTCACTATCCTGTCCCTGAAGAATATGAGCACCCACCTCGTGGCTTCAGTACAAAATTTGATGGATCTTCTATCCTTAAGAGATGCAGTTCCAATGCTAATTCTAGGAATGTTGACTCGGAACGAGTCGGGTTCGATTCCAACTGGTTAAACCGTTGGATGGAATTAGATAACAAGTGTAGCCAAACTGGAGATGCTTCATTGAAAAATAATGGACGCCCTGATGATGATAAAAGTGACAAGATTCTCGAAGTGGATACTTGGAGGCCACACTTCAAGTCCCACCACAACAGTAGCAGCTCCTCTCAAGCAGCACATTATTATCTGAATGCTGATTACAATAATGAGAACTTTGCGGTGGCACACGAGTCTCCATCAAAACGTTCAGCAAAGGCTCTAAACCAAAGCTTCTCATCAAGGGAGGTGTTGCAGCTAAGATCATTGAAGTTTCACAAAGGAAAAGAAGAAGCAAGTTCAAGAACTGCTGACAATAGTCCACAAGCATTTTCTGCCAATTCTAGAAACGGAAGTGGTGCAAGGAGAGGAGGAGGACCCTTTACACCTACTAGGAGTGAGTGTTCGTTGGGTTTCTTCAGTGGCTACACGGGTCACCCCAATTACATGGCAAACACTGAATCTTTTAGAGCTAAGGTTAGATCACAAAGTGCACCTAGACAAAGGCTGGAGTTTGACAGATACGGTTCCACTAGGAGGCCTGTTCCTTTGGTGGGGCCTAATTCAGACCATGATTCAGATTTAAGGAACAAAGTCTTACCTCCCTTTAACCAAACGAACAGAATTGGGAGTAGCAATTTAAGGTGA 1395 0.4925 MGFLRRLFGAKKPSDCKSGKKRWTFLKHTVRNKSLPPPPIPPALNTHFDSSTPLDANKHAIAVAAATAAVAEAALAAAHAAAEVVRLTSGGVAATSTSSRTAVTAARVGNLETAAVRIQSAFRGYLARRALRALKALVKLQALVRGHIVRKQSADMLRRMQTLVRLQAQARASRAHLSDNTPSFNFNSSLLSHYPVPEEYEHPPRGFSTKFDGSSILKRCSSNANSRNVDSERVGFDSNWLNRWMELDNKCSQTGDASLKNNGRPDDDKSDKILEVDTWRPHFKSHHNSSSSSQAAHYYLNADYNNENFAVAHESPSKRSAKALNQSFSSREVLQLRSLKFHKGKEEASSRTADNSPQAFSANSRNGSGARRGGGPFTPTRSECSLGFFSGYTGHPNYMANTESFRAKVRSQSAPRQRLEFDRYGSTRRPVPLVGPNSDHDSDLRNKVLPPFNQTNRIGSSNLR 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g02257 464 ProSiteProfiles IQ motif profile. 111 139 IPR000048 GO:0005515
Gma10g02257 464 MobiDBLite consensus disorder prediction 351 368 - -
Gma10g02257 464 Gene3D - 109 164 - -
Gma10g02257 464 Pfam Protein of unknown function (DUF4005) 356 419 IPR025064 -
Gma10g02257 464 Pfam IQ calmodulin-binding motif 114 132 IPR000048 GO:0005515
Gma10g02257 464 Pfam IQ calmodulin-binding motif 135 152 IPR000048 GO:0005515
Gma10g02257 464 MobiDBLite consensus disorder prediction 342 375 - -
Gma10g02257 464 PANTHER IQ-DOMAIN 5-RELATED 1 462 - -
Gma10g02257 464 MobiDBLite consensus disorder prediction 448 464 - -
Gma10g02257 464 SMART iq_5 133 154 IPR000048 GO:0005515
Gma10g02257 464 SMART iq_5 110 132 IPR000048 GO:0005515
Gma10g02257 464 PANTHER CALMODULIN-BINDING PROTEIN 1 462 - -
Gma10g02257 464 MobiDBLite consensus disorder prediction 408 464 - -
Gma10g02257 464 ProSiteProfiles IQ motif profile. 135 162 IPR000048 GO:0005515
Gma10g02257 464 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 106 156 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g02257 Gma-Chr10 50123751 50128638 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g02257 1 420 IQD Protein Family AT5G62070 43.908 1.84e-57 193
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g02257 - - gmx:102668067 801.971
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g02257 10 50123751 50128638 Gma10g02257 10 50123751 50128638 ECH
Gma10g02257 10 50123751 50128638 Gma20g01462 20 41745716 41751180 GST