Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g02231 ATGGTTAGCCAAAGGCAGCGACTCGCTCGGAAGCGATACAAATCGGAACACCCTGAGCTCTTTCCGAAGCCCGAGCCCACACCCCCCAAAGACCCCGACAAGAAGAAAAAGAAGAACAAAAACAGCGCTTTCAAGCGCAAGAGGCCCGAGCCCAAGCCCGGCTCCAGAAAAAGACACCTTCTCAGAGTCCCCGGCATGAAGCCCGGCGAGAGCTGTTTCATCTGCAAGGCCATGGACCACATCGCCAAGCTCTGCCCCGAAAAGGCCGAATGGGAAAAGAACAAGATATGTTTGCGGTGTCGACGACGCGGTCATAGAGCTAAGAACTGCCCTGAGGTACTAGATggcgccaaggatgccaagtattgctataactgtggggaaaatggtcacgctctcacacaatgtctgcaccctCTTCAAGAAGGAGGGACAAAGTTTGCTGAGTGCTTTGTCTGTAATCAACGTGGACACTTGAGTAAAAACTGTCCTCAAAATACTCATGGCATTTATCCAAAGGGTGGTTGCTGTAAAATATGTGGTGGTGTGACACATTTGGCAAAGGATTGCCCTGACAAAGGGAAGAGTGGATCTGTTGCTGCTAACAGGCCTGCTGATGGATGGATGAGAATTGATGAGAGGCCCATGGGTCAGGTTACCAAATTTGTCAGCGGGGATGATATTGAGGATGACTTCATGACAGATGACATACATAGTGGAGACAAGAAAAAGCTAGCAAAGTCAACTGAAGACCCTGTAAAACCAAAGAAGAAGAAGGAGGGTCCTAAAGTTGTGAACTTTTAA 804 0.444 MVSQRQRLARKRYKSEHPELFPKPEPTPPKDPDKKKKKNKNSAFKRKRPEPKPGSRKRHLLRVPGMKPGESCFICKAMDHIAKLCPEKAEWEKNKICLRCRRRGHRAKNCPEVLDGAKDAKYCYNCGENGHALTQCLHPLQEGGTKFAECFVCNQRGHLSKNCPQNTHGIYPKGGCCKICGGVTHLAKDCPDKGKSGSVAANRPADGWMRIDERPMGQVTKFVSGDDIEDDFMTDDIHSGDKKKLAKSTEDPVKPKKKKEGPKVVNF 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g02231 267 MobiDBLite consensus disorder prediction 12 38 - -
Gma10g02231 267 MobiDBLite consensus disorder prediction 39 62 - -
Gma10g02231 267 MobiDBLite consensus disorder prediction 235 267 - -
Gma10g02231 267 MobiDBLite consensus disorder prediction 1 62 - -
Gma10g02231 267 ProSiteProfiles Zinc finger CCHC-type profile. 97 112 IPR001878 GO:0003676|GO:0008270
Gma10g02231 267 Gene3D - 145 204 - -
Gma10g02231 267 Gene3D - 64 120 - -
Gma10g02231 267 ProSiteProfiles Zinc finger CCHC-type profile. 123 136 IPR001878 GO:0003676|GO:0008270
Gma10g02231 267 PANTHER OS04G0555800 PROTEIN 1 267 - -
Gma10g02231 267 SUPERFAMILY Retrovirus zinc finger-like domains 65 112 IPR036875 GO:0003676|GO:0008270
Gma10g02231 267 SUPERFAMILY Retrovirus zinc finger-like domains 116 167 IPR036875 GO:0003676|GO:0008270
Gma10g02231 267 Pfam Zinc knuckle 150 165 IPR001878 GO:0003676|GO:0008270
Gma10g02231 267 MobiDBLite consensus disorder prediction 233 267 - -
Gma10g02231 267 SMART c2hcfinal6 122 138 IPR001878 GO:0003676|GO:0008270
Gma10g02231 267 SMART c2hcfinal6 96 112 IPR001878 GO:0003676|GO:0008270
Gma10g02231 267 SMART c2hcfinal6 176 192 IPR001878 GO:0003676|GO:0008270
Gma10g02231 267 SMART c2hcfinal6 71 87 IPR001878 GO:0003676|GO:0008270
Gma10g02231 267 SMART c2hcfinal6 149 165 IPR001878 GO:0003676|GO:0008270
Gma10g02231 267 ProSiteProfiles Zinc finger CCHC-type profile. 150 165 IPR001878 GO:0003676|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g02231 Gma-Chr10 49900586 49904689 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g02231 - - gmx:121174300 481.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g02231 10 49900586 49904689 Gma10g02231 10 49900586 49904689 ECH
Gma10g02231 10 49900586 49904689 Gma20g01488 20 41981044 41991551 GST