Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g02224 ATGGATTTCGTCGTGGCGTTCGCATTATTGTGTCTATTCACGATGGAGCCATGGCGCGTTCTCTCGCAGCAGCAACAGAGACTTCTCGTGAACATGACGCTCGTTCCAAACGCTCGTGCTAGCGGTGCTCTTTGTTTGGACGGAAGTTTACCGGCGTATCACTTGCACAGAGGATTTGGAGCTGGTAAAGACAACTGGCTTCTACAATTTGAGGGAGGTGGATGGTGCAATGACTTGAAATCATGCTTGGAGAGAGCCACAACTAGGAGGGGTTCAACACGTTATATGACCAAGTGGGAGGTGTTCTCTGGTATTTTAAGCAATATTGCTTTTGTCCGTGCTGTACCAGATTTTTACAATTGGAACCGTGTGAAGCTGAGATATTGTGATGGAGCTTCATTTACTGGAGACGCTGTGTTCACTAACAAGACAACAACACTTCATTTCAAAGGGCAAAGAATTTGGGAAGCCATTATTCGCGACCTTTTACCACAGGGTTTGGGAAAGGCACGGAAGGCTTTGCTTTCAGGTTGCTCAGCAGGAGGGTTAGCGACCTTTCACCATTGTGACGCCTTCGCCAAGTATTTGCCAACGAATGCTAGTGTTAAATGCTTGAGTGATGCCGGTTTTTTTCTTGATGAAAGAGATATCAGTTTGAATCACACTATGAGGTATAATTTCAAAAGTCTAGTTCAATTGCAGGGGATAGAGAAGAACCTGAACAGAAATTGTACCAGAGCACTGTACTTTCCAGACTTGTGCTTCTTTCCACAATATGCGTTGAGATACATATCAACACCATATTTTATCTTGAACTCTGCCTATGATGTATTCCAGCAGTTCACTCATATATTGGTGCCACCCTCTGCTGATATGCGCGGACACTGGAAACACTGCAAGGCAAACCTGGCAGAGTGTACAACAGAACAAATTGATACATTGCAAGGTTTTAGGCTAGACATGCTTGGAGCTTTGAGACCGTTCTATATGAATTCAAGAAGAGGGGGGATGTTCATAAATTCATGTTTTGCTCATTGCCAAAGTGAACTACAAGAAACATGGTTTGGGGATGATTCTCCAAGAATAAACAATAAGACTATTGCCGAAGCTACTGTGCATATCCTTGTGATGCAACTTGTCATAATCTTATACCGTAACCTCAGGTTAATTGGAAGATTAAACTGA 1185 0.4329 MDFVVAFALLCLFTMEPWRVLSQQQQRLLVNMTLVPNARASGALCLDGSLPAYHLHRGFGAGKDNWLLQFEGGGWCNDLKSCLERATTRRGSTRYMTKWEVFSGILSNIAFVRAVPDFYNWNRVKLRYCDGASFTGDAVFTNKTTTLHFKGQRIWEAIIRDLLPQGLGKARKALLSGCSAGGLATFHHCDAFAKYLPTNASVKCLSDAGFFLDERDISLNHTMRYNFKSLVQLQGIEKNLNRNCTRALYFPDLCFFPQYALRYISTPYFILNSAYDVFQQFTHILVPPSADMRGHWKHCKANLAECTTEQIDTLQGFRLDMLGALRPFYMNSRRGGMFINSCFAHCQSELQETWFGDDSPRINNKTIAEATVHILVMQLVIILYRNLRLIGRLN 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g02224 394 Pfam Pectinacetylesterase 23 371 IPR004963 GO:0016787
Gma10g02224 394 PANTHER NOTUM-RELATED 22 370 IPR004963 GO:0016787
Gma10g02224 394 PANTHER PECTIN ACETYLESTERASE 9 22 370 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g02224 Gma-Chr10 49788474 49797201 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g02224 1 369 Carbohydrate Esterase AT5G23870 65.405 9.13e-176 494
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g02224 K19882 - gmx:100802358 744.191
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g02224 10 49788474 49797201 Gma10g02224 10 49788474 49797201 ECH
Gma10g02224 10 49788474 49797201 Gma20g01496 20 42073008 42083007 GST