Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g02215 ATGCCAGTTGCAAAACTCCCAGCCTCTGGCACTATCGATTTCAGGAAAACAGACGATGGAAGTGATTCTTTAGACACAATAATCAGACAAGCAATTGGAAAAGAACCTTTGCTTTCCTTTCCTAGGGCCGGTGACAGCCCAGTACAGTGGATTCAATTACTTAATGCTTTAGATCAGCAAGAACTTCCAGGGTGGCCTTTGCTATCTCCTGTGAAGGTTCAGTTACAGAAGTGCAACAAGTGTTCTCGAGAATTTTGCTCTCCCATTAACTATAGAAGACATATACGCGTACAGCATCGATTGAAAAAGCTTGATAAGGATTCTGAAAAAAATAGGGATCTTTTAGGGGCATATTGGGATAAGCTCTCCATAGAAGAGTCAAAGGAAGTTGTGTCATTCAAGAATGTGATGCTGGAGGAAGTTCCAGGGTCTTCAATTTTAGAAGCTTTGACAACTCTTAGAAAACAAGGATTTTCTTCTCTTCCACAATATTATCTGAGGGCTGGTACTGCCCTTTTGAATATTGTTCAATCCAGGCCTTCTAGTTTTCCTATATCTTCCCAAGAGTTGTTCAGTATCCTAGATGATTCTAGTGAAAAAACATTTTTGGTTGGATCAGCAGTGTCGATGCAAAGATATGTTTTTGATGGAGAGGCTGGAAAGATTGGTCTTGAACCAAAAAACCTAGTTGCTTGCACAAGTTTCTTGCTAGAGCAGAAACTGGTGAAGGCCTGGCTTGCTGACAAGGATGCTGAAGCATTGAGATGCCAGAAGCTGCTGGTGGAGGAGGAGGAAGCTGCTCAGAAAAGAAAAGCTGAGATTTTAGAGAGGAAACGCCAAAAAAAGCTTAGACAGAAAGAACACAAGGCCAGGGAACGACTCGAAGATGACACAGAAATTAAAGAGAACATAAGCAGCACAGGAGAGGATGTTTTGCCAGCTGAAGCTTCTTCTGGTACATGTGACTTTGAAGCACAGAATCCAGATATATTTGCGGATCATTCTCCTCCACCACATGTAACTTCTCGCTGCCTAGACACTAATGAAGTTGTAGAAGGGGATACAGTGTCAGGTTATGATTTTGACACTGATCAGTATATAGAGCGACAGGCATCACGGGGACATAATCGCCGTCGCATAATGGCTGCCAGATGGCAAGGGCTGCCAAAATCACAATGGGCCAAAGCCAATGGTTCGCATGCAGGCCAGAATTCTCAAATGTCAAAGCTTGGAGTTATTCAAAAACATGGAACCAACCGTGATCAAAGGGCAGCTCCTATAGTTAATGGTAGTAAGGTTTGGAGCCGAAAACCTAAACCAGAAACTAATGGGGTGGTTTTAAAAGCCAAACTGCAGAAAGAACCAGACAAAGGTAAGAGTCATGAAGTTTTGATAGGATCTGTATCAGTTAGTCTGGATTATTGCAGCAGCCATTCACAAGGGAATTTGGTGGCAGCCCAGCGGGACTGCGTGGTAGAGAATCTAGCCAAGCAGAATACTGCTCAGGAAAAGCCAGTGAAACATGATTCCTTTCAGGGAAGTAATGGTCGGTTAACAGTTAAGCTTTGGAGGCCGGTTAGCCAGCTTGGAACTAAAGATCCATTGCCACTTCAAAATGGTGAGACAGAAGCTGATGTAATTAATGGAAAATATGACCAAAATTTGTCAGGTCAAAGTAGTTTACGGTTGTGTAGTATAGATGGTAGTGATATTGGTTTTGAGGACAATTTTTCCCACACTGGGGCTAAAGTAGATTCAGAAAGCTTACGTCTAACCAGCCATGCTGCAAAAGCCTTTCTTGCACAAAGATGGAAAGAAGCTATCTCATCTAACCATGTGAAGTTGGTTGTTACACCTGATTGTCAATCTTCTAATGCGGACAGATTTAACATTCTTGCAAATACAGAGAACCGATTGCCTGCAACTTCTGGAGTTGCTAAATCCAAACCCAAAACAAAGCCTGAGAAGGGAATGAAGATAAAGTACATTCCCAAACAAAAAGAAGCAACCTAG 2013 0.4237 MPVAKLPASGTIDFRKTDDGSDSLDTIIRQAIGKEPLLSFPRAGDSPVQWIQLLNALDQQELPGWPLLSPVKVQLQKCNKCSREFCSPINYRRHIRVQHRLKKLDKDSEKNRDLLGAYWDKLSIEESKEVVSFKNVMLEEVPGSSILEALTTLRKQGFSSLPQYYLRAGTALLNIVQSRPSSFPISSQELFSILDDSSEKTFLVGSAVSMQRYVFDGEAGKIGLEPKNLVACTSFLLEQKLVKAWLADKDAEALRCQKLLVEEEEAAQKRKAEILERKRQKKLRQKEHKARERLEDDTEIKENISSTGEDVLPAEASSGTCDFEAQNPDIFADHSPPPHVTSRCLDTNEVVEGDTVSGYDFDTDQYIERQASRGHNRRRIMAARWQGLPKSQWAKANGSHAGQNSQMSKLGVIQKHGTNRDQRAAPIVNGSKVWSRKPKPETNGVVLKAKLQKEPDKGKSHEVLIGSVSVSLDYCSSHSQGNLVAAQRDCVVENLAKQNTAQEKPVKHDSFQGSNGRLTVKLWRPVSQLGTKDPLPLQNGETEADVINGKYDQNLSGQSSLRLCSIDGSDIGFEDNFSHTGAKVDSESLRLTSHAAKAFLAQRWKEAISSNHVKLVVTPDCQSSNADRFNILANTENRLPATSGVAKSKPKTKPEKGMKIKYIPKQKEAT 670
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g02215 670 Coils Coil 272 292 - -
Gma10g02215 670 MobiDBLite consensus disorder prediction 640 670 - -
Gma10g02215 670 ProSiteProfiles Zinc finger C2H2 type domain profile. 76 104 IPR013087 -
Gma10g02215 670 MobiDBLite consensus disorder prediction 649 670 - -
Gma10g02215 670 ProSitePatterns Zinc finger C2H2 type domain signature. 78 99 IPR013087 -
Gma10g02215 670 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 1 669 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g02215 Gma-Chr10 49702016 49707610 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g02215 19 667 C2H2 Transcription Factor Family AT4G25610 45.468 2.67e-158 467
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Gma10g02215 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g02215 - - gmx:100799153 1322.38
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g02215 10 49702016 49707610 Gma10g02215 10 49702016 49707610 ECH
Gma10g02215 10 49702016 49707610 Gma20g01506 20 42134206 42154289 GST
Gma16g01565 16 36065956 36075941 Gma10g02215 10 49702016 49707610 PCT
Gma09g01302 09 35326168 35328718 Gma10g02215 10 49702016 49707610 PCT
Gma10g02215 10 49702016 49707610 Gma16g01565 16 36065956 36075941 PCT
Gma10g02215 10 49702016 49707610 Gma09g01302 09 35326168 35328718 PCT