Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g02210 ATGCTTACATGGTGGGGGAAATCATCATCAAAAAAAACCAAGAAGAAAGCAAATAAGGAAAGTTTTTTTGACACACTGCACCGAAAACTCAGAATTTCATCTGAAGGTAAAGTAAACATTAGATCTGGAGGATCTCGTAGGCATTGCAATGACACAATTTCAGAGAAGGGGGATCATTCTCCATCTGGATCAAGATCGCCTTCACCTTCCAAAGTGGCAAGGTGTCAAAGTTTTATTGATAGGCCTCATGCTCAGCCACTTCCACTTCCTGGTCTGCACCCTTCAAGTGTAGGCCGAGTAGATTCCGAAATTAGCATATCATCAAAATCAAGATTGGAAAAAGTCTCCAAGCCATCATTGTTTCTTCCACTTCCAACACCTGGATGCATACGTTGTAGGCCGAACCCTGCAGATTTGGATGGAGATATGGTCACTCCTTCAGTCTTTAGTGATTGCTCTGCTGACAGTGATGAGCCGGCAGACTCACACAATCGTAGTCCTCTAGCAACTGACTGTGAGACTGGGACTAGAACTGCTGCTGGCAGTCCTTCCAGCTCGATGCTCAAGGATCAACCACCTACTGTTTCCCTACTGAATTCAACAGGAGTAAAGAAACCAGGAAATATTCTAAGTAATCATATGTCTTCTACTTCACCAAAACATAGGCCTTTACGCAACCATGTTCCAAATCTTCAGGTTCCTCCTCATGGTGCCTTCTATAGTACTCCTGATAGTTCCTTGTCAAGTCCATCAAGAAGTCCATTGAGAGCATTTGGCACAGATCAGGTGTTGAATTCTGCTTTTTTGGCTGGAAAGCCATATCCAGAGGTCAATTTTGTTGGGTCTGGGCATTGCTCTAGTCCAGGTTCAGGTCACAATTCTGGGTATAATTCAATGGGAGGGGACATGTCAGGACCGTTACTTTGGCAACCAAGCAGGGGTAGCCCTGAGTATTCTCCAGTACCTAGTCCCAGAATGACTAGCCCTGGTCCAAGCTCTAGAATTCAGAGTGGAGCAGTCACACCTATTCATCCCAAAGCCGGGGGAACACCCACAGAATCACAGACTCATCGTTTGCCTCTTCCTCCTTTGTCAGTTTCTAATTCCTCACCGTTCTCTCATTCAAATTCTGCAGCAACATCTCCATCTATGCCAAGAAGTCCAGCTAGAGCAGATAATCCAAGCTCTGGCTCACGTTGGAAGAAAGGGAAGCTGCTTGGCAGCGGCTCATTTGGACATGTCTATCTTGGTTTCAATAGTGAAAGTGGCGAAATGTGTGCAGTGAAGGAGGTTACCCTGTTTTCAGATGATCCCAAGTCTATGGAAAGTGCTAAGCAATTTATGCAGGAAATTCATTTATTAAGCCGTTTACAGCATCCAAATATCGTCCAGTATTATGGTTCTGAAACAGTTGATGACAAGCTTTACATATACCTTGAATATGTATCTGGAGGCTCCATACATAAACTTCTTCAAGAATATGGGCAATTTGGTGAACTAGTTATTCGTAGTTATACTCAACAGATTTTGTCAGGGCTTGCTTATTTGCATGCTAAAAATACTCTCCATAGGGATAtcaaaggagcaaatatactggtagatccaactggtcgggtcaagttggcagactttggcatggcaaaacatATAACAGGGCAATCGTGTCTATTGtcattcaagggaaccccttactggatggctcctgaggttataaagaactctaatggatgcaaccttgcagtggatatatggagtcttggatgcacggttttggaaatggctactaccaaacctccttggtttcagtatgaagcgGTTGCTGCCATGTTCAAGATTGGTAATAGCAAGGAACTCCCAACAATCCCTGATCATCTCTCAAATGAAGGAAAAGATTTTGTTAGGAAATGTCTTCAGCGTAACCCGTATGATCGCCCTTCAGCCTGTGAATTGTTGGACCACCCTTTTGTAAAAAATGCTGCACCTTTGGAAAGACCTATTCTGGCTCCTGAAGTGTTGGACCCTGTTTCTGGGATCATACAGGGAGCAAAAGCTCTGGCCGCTGGACAAGGAAAGAATCTTTCTAGCTTGGATTCAGATAGACTTTCTATTCATTCTTCTAGATTTTTGAAAACTAATCCTCGTGAAAGTGAAATCCATATTCCAAGGAATATATCTTGCCCTGTTTCTCCCATTGGAAGCCCACTTTTGAGGTCAAGATCACCACAGCACAGGAATGGGAAAATGTCTCCTCCTATATCTAGCCCTCGGACTGCTTCTGGGGCGTCCACCCCTCTTGCTGGTGGCAGTGGTGCCATTCCATTTGGTAATCACTCTAAACAGCCAATTTACTTTCAAGAGGGTTTTGGAAGCATTCCCAAGTCCTCAAATGGTGTCTACATTAATGGCCATTCTCATCACGACTCGAGTGTTGACATTTTTCGAGGAATGCAAATAGGATCTCACATTCAACCAGAATTGGTTTCCAGTGAAAATGATGTTTTGGTTAATCAGTTTGCAAGGCATCCTCATGCAGAGCCATATGATTTTCAGTCAGTCTTGGCAGATCGTGTTGGCCGGCAGCTGCTGAGGGAACATGTTAAGATTAACCCATCCATTGATCTCAGTCCCAACTCGTCTTTGCTTAGCCGGCCAAACGGTTTATGA 2664 0.4035 MLTWWGKSSSKKTKKKANKESFFDTLHRKLRISSEGKVNIRSGGSRRHCNDTISEKGDHSPSGSRSPSPSKVARCQSFIDRPHAQPLPLPGLHPSSVGRVDSEISISSKSRLEKVSKPSLFLPLPTPGCIRCRPNPADLDGDMVTPSVFSDCSADSDEPADSHNRSPLATDCETGTRTAAGSPSSSMLKDQPPTVSLLNSTGVKKPGNILSNHMSSTSPKHRPLRNHVPNLQVPPHGAFYSTPDSSLSSPSRSPLRAFGTDQVLNSAFLAGKPYPEVNFVGSGHCSSPGSGHNSGYNSMGGDMSGPLLWQPSRGSPEYSPVPSPRMTSPGPSSRIQSGAVTPIHPKAGGTPTESQTHRLPLPPLSVSNSSPFSHSNSAATSPSMPRSPARADNPSSGSRWKKGKLLGSGSFGHVYLGFNSESGEMCAVKEVTLFSDDPKSMESAKQFMQEIHLLSRLQHPNIVQYYGSETVDDKLYIYLEYVSGGSIHKLLQEYGQFGELVIRSYTQQILSGLAYLHAKNTLHRDIKGANILVDPTGRVKLADFGMAKHITGQSCLLSFKGTPYWMAPEVIKNSNGCNLAVDIWSLGCTVLEMATTKPPWFQYEAVAAMFKIGNSKELPTIPDHLSNEGKDFVRKCLQRNPYDRPSACELLDHPFVKNAAPLERPILAPEVLDPVSGIIQGAKALAAGQGKNLSSLDSDRLSIHSSRFLKTNPRESEIHIPRNISCPVSPIGSPLLRSRSPQHRNGKMSPPISSPRTASGASTPLAGGSGAIPFGNHSKQPIYFQEGFGSIPKSSNGVYINGHSHHDSSVDIFRGMQIGSHIQPELVSSENDVLVNQFARHPHAEPYDFQSVLADRVGRQLLREHVKINPSIDLSPNSSLLSRPNGL 887
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g02210 887 CDD STKc_MEKK1_plant 399 656 - -
Gma10g02210 887 MobiDBLite consensus disorder prediction 729 772 - -
Gma10g02210 887 MobiDBLite consensus disorder prediction 167 221 - -
Gma10g02210 887 MobiDBLite consensus disorder prediction 286 300 - -
Gma10g02210 887 MobiDBLite consensus disorder prediction 35 55 - -
Gma10g02210 887 Pfam Protein kinase domain 401 656 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma10g02210 887 MobiDBLite consensus disorder prediction 286 401 - -
Gma10g02210 887 SMART serkin_6 400 656 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma10g02210 887 MobiDBLite consensus disorder prediction 35 73 - -
Gma10g02210 887 ProSiteProfiles Protein kinase domain profile. 400 656 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma10g02210 887 MobiDBLite consensus disorder prediction 348 394 - -
Gma10g02210 887 MobiDBLite consensus disorder prediction 56 73 - -
Gma10g02210 887 MobiDBLite consensus disorder prediction 150 221 - -
Gma10g02210 887 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE YODA 1 800 - -
Gma10g02210 887 Gene3D Transferase(Phosphotransferase) domain 1 397 671 - -
Gma10g02210 887 SUPERFAMILY Protein kinase-like (PK-like) 383 674 IPR011009 -
Gma10g02210 887 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 1 800 - -
Gma10g02210 887 MobiDBLite consensus disorder prediction 735 764 - -
Gma10g02210 887 ProSitePatterns Protein kinases ATP-binding region signature. 406 429 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g02210 Gma-Chr10 49666330 49672454 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g02210 2 876 MAP Kinase Kinase Kinase AT1G63700 57.335 0.0 835
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Gma10g02210 Pkinase 1.9e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g02210 K20717 - gmx:100782929 1695.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g02210 10 49666330 49672454 Gma10g02210 10 49666330 49672454 ECH
Gma16g01559 16 35995374 36003057 Gma10g02210 10 49666330 49672454 PCT
Gma09g01293 09 35163708 35169240 Gma10g02210 10 49666330 49672454 PCT