Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g02203 ATGTCGTCGCCGAGGTTCCCAGGTGGTGGAGCCTCTGATTTCTACGGCGGAGCAGGAGGATTTCCCAGTCAATCCACGGCGCTTCAACCCACCATGAACAACCACTCCGCCACCACACACCACCCTCTATACCGATCCCAACCTTCAATTTTTCTAAACCCCTCGTCCCACATCGCCCAACACCAAACACCCACTCTCATCGGTAAACGCACCCTCGCCGAATTCCAAACCCACAACCACAGCCTTAACCTTATTAACAACAACGATAACCTACTCCTTTCAAACCATCAACTTCGTTCTGTGAAGCCCAGAACTTTCCAGCACACAGAATTATCCACCTTTCCGTCACGTCGTTACGGCCTACCCCTTCTCCACCACCTTCGCCCTAACGCTGTTAACGCACAACAACAACCCGTTACGAATTCGATCCTCGCCAATACAAATTATTTGTCTCCGGTTCACAGCAGACTAACCGCAACCCACGAACCGGAGAAGAACCTAATAGCCCTCCGTCTCCAGGAGTTGGAAAAGCAGCTTCTAGAAGACAATGAAGACGACGCCGTTTCGGTCATTACCACCACCACTTCTGAATGGTCACACACAATACAAAACCTAATCACTCCGCAGAAACCCGCGTCTTCGTCTCCCACTTCCTCTACGACGTCGTCTAACACCTCCGTAGAATCCAGCAGTTACAAACAGTCCCTAACGGAGGCCGCAACCGCGATTTCAGAAGGCAAATTCGATGCCGCCACTGAGATCCTAACCCGATTGTCGCTGAATTCAGATCAACGCTTCGTGAATTGCATGGTTTCTGCGCTCAAATCTCGGATGAATCACGTTGAGTATCCACCTCCGGTTGCCGAATTGTTCGGCACAGAACACGCCGAGTCGACTCAGTTGCTGTTCGAGTACTCGCTCTTCTTCAAGGTCGCACGCATGGTCGCCAACATCGCAATACTCGAATCCGCATTAACCGAGAGCGGGAAGCTCTGCGTGGTGGATTTCGATATCTGCGACGAGAACCAATACGTGAGTCTTCTTCACGAGCTTTCGGCCCGGCGGAAGGGCGCTCCGGCTGCCGTGAAGATCGTCGTGGTGACGGAGAATTGCGCCGACGACGAGAGGCTGAATATTGTGGGCGTGTTGCTGGGGAGACACGCGGAGAAGCTTGGGATTGGCTTCGAATTCAAAGTGCTGACTCGGAGAATCGCCGAGTTGACTCGCGAGTCGCTGGGTTGCGACGCGGACGAGCCGCTGGCGGTGAACTTTGCGTACAAGCTTTATAGAATGCCTGACGAGAGCGTCTCCACGGAGAACCCTCGCGACAAGCTTCTGCGGCGTGTGAAGACACTCGCGCCGCGCGTGGTGACGCTGGTGGAGCAGGATGCCAACGCCAACACGGCGCCGTTCGTGGCTCGAGTAACCGAGTTGTGCGCGTATTACGGCGCGCTGTTCGACTCGCTCGAGTCGACGATGGCACGGGAGAACTTGAAGCGAGTCAGGATCGAGGAGGGACTGAGTCGGAAGGTGGTGAACTCGGTGGCGTGCGAAGGAAGGGACCGCGTGGAACGGTGCGAGGTGTTTGGGAAGTGGCGCGCGCGTATGAGCATGGCTGGGTTCAGGTTGAAGCCACTGAGTCAGCGAGTCGCTGATTCGATCAAAGCGCGACTCGGTGGCGCTGGGAACCGAGTCGCGGTAAAAGTAGAGAACGGTGGGATTTGCTTTGGCTGGATGGGAAGAACTCTCACCGTCGCATCTGCTTGGTGTTAA 1773 0.551 MSSPRFPGGGASDFYGGAGGFPSQSTALQPTMNNHSATTHHPLYRSQPSIFLNPSSHIAQHQTPTLIGKRTLAEFQTHNHSLNLINNNDNLLLSNHQLRSVKPRTFQHTELSTFPSRRYGLPLLHHLRPNAVNAQQQPVTNSILANTNYLSPVHSRLTATHEPEKNLIALRLQELEKQLLEDNEDDAVSVITTTTSEWSHTIQNLITPQKPASSSPTSSTTSSNTSVESSSYKQSLTEAATAISEGKFDAATEILTRLSLNSDQRFVNCMVSALKSRMNHVEYPPPVAELFGTEHAESTQLLFEYSLFFKVARMVANIAILESALTESGKLCVVDFDICDENQYVSLLHELSARRKGAPAAVKIVVVTENCADDERLNIVGVLLGRHAEKLGIGFEFKVLTRRIAELTRESLGCDADEPLAVNFAYKLYRMPDESVSTENPRDKLLRRVKTLAPRVVTLVEQDANANTAPFVARVTELCAYYGALFDSLESTMARENLKRVRIEEGLSRKVVNSVACEGRDRVERCEVFGKWRARMSMAGFRLKPLSQRVADSIKARLGGAGNRVAVKVENGGICFGWMGRTLTVASAWC 590
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g02203 590 Pfam GRAS domain family 233 589 IPR005202 -
Gma10g02203 590 PANTHER SCARECROW-LIKE PROTEIN 8 61 590 IPR030013 -
Gma10g02203 590 MobiDBLite consensus disorder prediction 1 41 - -
Gma10g02203 590 ProSiteProfiles GRAS family profile. 223 590 IPR005202 -
Gma10g02203 590 MobiDBLite consensus disorder prediction 206 231 - -
Gma10g02203 590 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 61 590 IPR005202 -
Gma10g02203 590 MobiDBLite consensus disorder prediction 22 41 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g02203 Gma-Chr10 49597538 49599310 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g02203 33 589 GRAS Transcription Factor Family AT5G52510 45.972 1.69e-144 431
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Gma10g02203 GRAS 8.8e-90 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g02203 - - gmx:100797571 1103.97
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g02203 10 49597538 49599310 Gma10g02203 10 49597538 49599310 ECH
Gma10g02203 10 49597538 49599310 Gma20g01518 20 42226137 42228391 GST
Gma16g01550 16 35838827 35841194 Gma10g02203 10 49597538 49599310 PCT
Gma09g01274 09 34661290 34663837 Gma10g02203 10 49597538 49599310 PCT
Gma10g02203 10 49597538 49599310 Gma16g01550 16 35838827 35841194 PCT
Gma10g02203 10 49597538 49599310 Gma09g01274 09 34661290 34663837 PCT