Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g02197 ATGGCGGCAGGACTCTCCACCGCCGCAATCTTAAAGCCCTACAATCTCGTCCAACCCCCAATCCCTCTTTCTAAACCAACCACATCACTCTTCTTCAACCCCTTAAGATGTTTCCATCACAGTACAATCCTTCGAGTTCGACCCAGAAGAAGAATGAGCGGCTTCACCGTTTGCGTCCTCACGGAGGATTCCAAAGAGATCAAAACGGTCGAACAAGAACAAGAACAAGTGATTCCTCAAGCCGTGTCAGCAGGTGTGGCAGAGAAGTTGGCGAGAAAGAAGTCCCAGAGGTTCACTTATCTCGTTGCGGCTGTCATGTCTAGCTTTGGCATCACCTCTATGGCAGTCTTTGCCGTTTATTATAGATTCTCCTGGCAAATGGAGGGTGGAGATGTTCCTTGGTCTGAAATGCTAGGCACATTTTCCCTCTCCGTCGGTGCTGCTGTGGCTATGGAATTTTGGGCAAGATGGGCTCATAGAGCTCTTTGGCATGCTTCCTTGTGGCACATGCACGAGTCACACCATCGACCAAGAGAGGGACCGTTCGAGCTCAACGACGTTTTCGCGATAATTAACGCTGTCCCTGCGATCGCTCTTCTCTCATACGGTATTTTCCACAAGGGTCTGGTCCCTGGGCTCTGTTTTGGTGCAGGCCTTGGAATCACGGTATTTGGGATGGCCTACATGTTTGTCCACGATGGATTAGTTCATAAGAGATTCCCTGTGGGTCCCATTGCCAACGTGCCCTACTTCAGAAGAGTTGCTGCTGCTCACCAACTCCACCATTCGGATAAATTCAACGGGGCGCCATATGGCCTCTTTTTGGGACCAAAGGAAGTTGAAGAAGTGGGAGGGCTAGAAGAGCTAGAGAAAGAGATAAGTAGGAGAATCAGAATTGCCATCCAATTCCAAGGAATGAAATTTTATTGTGACCCGAACCTAAAGCAAGTGGTACAGTTTGCAAAGAAAATGGAGAAGATCACGCGAAATCAACACTGTGTTAGATACTCAGATCCCCCCTCTTTTCTCTATGCCATTCCCCCAGCTGGGAAGGGTGTACTGGAATCAGAGTGTAGCTGTGGGGTGCAGATTGATTACTATTCTTGTGTTGGCCTTTTCAGGATGGGCAAGTGCAAGGGTTGTGGGCAGATAGGAAGAATGGGAACAACAAATGGGTCAATGAGTTCTTATGAATTTTCGTTGATGTTGTCTCCTGTTGTTTCTTTTTGGGATTGTATGTTCCGTAAAATGAGGGCAACGCTTGAGAAAGGCAAAGAAGAAGCAGCTACTTCTGCTGCCATCATTTCCGAACTGGAGAAAAAGAAGCAGAAAAAGAAAGAAGAGCAACAAAGACTCGATGAAGAGGGTGCCGCAATTGCTGAAGCAGTGGCTCTGCATGTTCTACTCGGCGAAGACTCGGACGATTCTTGTAATGTTGTTATAAATGACTGTGAATGCAAGACCTGGAATTATAATCATAAGCTAGGCCTCTTCATGGATGAAAGAAGAGCTTGTTTTCCTCATCTAGATGGTGGTACGTGGTCTGTCTCTGCTGAAAGCGGCAAATGGTCCTTCACATCCGGCCCTCTTGAGAAGAACGTGTATGAACCCCTATATGAAGAAGCAGGATGGGGTCCTACTGGATTCTCTGTTGATCTTATAGCAGCACAAGCAGTTAGATCACTCCATATTGCAAAGGAGGCGGATGAAGCAAGGATTATCTTCTAA 1728 0.4711 MAAGLSTAAILKPYNLVQPPIPLSKPTTSLFFNPLRCFHHSTILRVRPRRRMSGFTVCVLTEDSKEIKTVEQEQEQVIPQAVSAGVAEKLARKKSQRFTYLVAAVMSSFGITSMAVFAVYYRFSWQMEGGDVPWSEMLGTFSLSVGAAVAMEFWARWAHRALWHASLWHMHESHHRPREGPFELNDVFAIINAVPAIALLSYGIFHKGLVPGLCFGAGLGITVFGMAYMFVHDGLVHKRFPVGPIANVPYFRRVAAAHQLHHSDKFNGAPYGLFLGPKEVEEVGGLEELEKEISRRIRIAIQFQGMKFYCDPNLKQVVQFAKKMEKITRNQHCVRYSDPPSFLYAIPPAGKGVLESECSCGVQIDYYSCVGLFRMGKCKGCGQIGRMGTTNGSMSSYEFSLMLSPVVSFWDCMFRKMRATLEKGKEEAATSAAIISELEKKKQKKKEEQQRLDEEGAAIAEAVALHVLLGEDSDDSCNVVINDCECKTWNYNHKLGLFMDERRACFPHLDGGTWSVSAESGKWSFTSGPLEKNVYEPLYEEAGWGPTGFSVDLIAAQAVRSLHIAKEADEARIIF 575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g02197 575 Pfam Fatty acid hydroxylase 147 274 IPR006694 GO:0005506|GO:0008610|GO:0016491
Gma10g02197 575 Coils Coil 431 458 - -
Gma10g02197 575 PANTHER BETA-CAROTENE 3-HYDROXYLASE 1, CHLOROPLASTIC 20 299 IPR045019 GO:0016491
Gma10g02197 575 PANTHER BETA-CAROTENE HYDROXYLASE 20 299 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g02197 Gma-Chr10 49536197 49545595 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g02197 1 217 Chloroplast and Mitochondria Gene Families AT4G25700 57.333 4.61e-81 252
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g02197 K15746 - gmx:547758 591.267
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g02197 10 49536197 49545595 Gma10g02197 10 49536197 49545595 ECH
Gma10g02197 10 49536197 49545595 Gma20g01523 20 42270346 42273998 GST
Gma16g01542 16 35769939 35772668 Gma10g02197 10 49536197 49545595 PCT
Gma09g01261 09 34411572 34414253 Gma10g02197 10 49536197 49545595 PCT
Gma10g02197 10 49536197 49545595 Gma16g01542 16 35769939 35772668 PCT
Gma10g02197 10 49536197 49545595 Gma09g01261 09 34411572 34414253 PCT