Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g02193 ATGGTGTCAAAAAATCCGAACCCCTCTGAGGCTTTAAACTTGGACCCCTCCGGCATGTCGCTCCCCGGAATCCTCCCCTTCGCCGCCGCCGCCGCCGCCGCAGTTTCCTTTGAGGATCCTGCTAAGAAGACTCGCAAGCCTTACACTATCACCAAGTCTAGGGAGAGTTGGACCGAACCTGAGCACGACAAGTTCCTTGAAGCTCTTCAATTatttgaccgtgactggaaaaagattgaagcatttgttggatcaaagacagttatccagatacgtagccatgctcaaaaatactttctaaaagttcagaagagtgggacaagtgaacatcttcctccacccagaccaaaaagaaaagctgttcatccatatcctcagaaagcttcaaaaaatgTTCCAGTACTGTCACAGGTATCAGGATCCTTTCAATCTTCATCAGCTTTGCTTGAACCTGGATACATATTAAAGCATGACTCTTCAGCAATGCCTAAAACTTCTATTATTGACACTACAGTGTCTTCCTGGTCAAACAACTATCTGCAGAAAACCACCAACGTATTGCATGGGCAAAAACAAAAAGTGAATAATTGTTGCAGTAGCAGTGAAAGTCCAAGAGCACAGTTGGTTGGTGAATCTAATGGTCGAGGGAATAATAGCCATCCATTGAGAGTTCTTCCGGATTTTGCTGAAGTATACAACTTCATTGGCAGTGTATTTGATCCAAATATAACTGGACATGTACAGAAACTAAAAAGGATGGACCCTATAGATGTTGAGACGGTGCTATTGTTGATGAGAAACCTGTCTATCAATTTAGCAAGCCCAGATTTTGAGGACCATAGAAGGCTGCTCGCATCATATGAGGTGGAACCTGAGGTCGATAAATACATCAATGCAGATCGAACCATGCTTGATGTGCGGTTAAAGAGTGCTACTTAG 939 0.36 MVSKNPNPSEALNLDPSGMSLPGILPFAAAAAAAVSFEDPAKKTRKPYTITKSRESWTEPEHDKFLEALQLFDRDWKKIEAFVGSKTVIQIRSHAQKYFLKVQKSGTSEHLPPPRPKRKAVHPYPQKASKNVPVLSQVSGSFQSSSALLEPGYILKHDSSAMPKTSIIDTTVSSWSNNYLQKTTNVLHGQKQKVNNCCSSSESPRAQLVGESNGRGNNSHPLRVLPDFAEVYNFIGSVFDPNITGHVQKLKRMDPIDVETVLLLMRNLSINLASPDFEDHRRLLASYEVEPEVDKYINADRTMLDVRLKSAT 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g02193 312 Gene3D - 57 104 - -
Gma10g02193 312 SUPERFAMILY Homeodomain-like 48 104 IPR009057 -
Gma10g02193 312 PANTHER SWI/SNF COMPLEX-RELATED 3 304 - -
Gma10g02193 312 ProSiteProfiles Myb-like domain profile. 49 99 IPR001005 -
Gma10g02193 312 SMART sant 53 101 IPR001005 -
Gma10g02193 312 Pfam Myb-like DNA-binding domain 54 99 IPR001005 -
Gma10g02193 312 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 52 101 IPR006447 GO:0003677
Gma10g02193 312 CDD SANT 56 99 IPR001005 -
Gma10g02193 312 MobiDBLite consensus disorder prediction 104 127 - -
Gma10g02193 312 ProSiteProfiles SANT domain profile. 52 103 IPR017884 -
Gma10g02193 312 PANTHER PROTEIN REVEILLE 6 3 304 - -
Gma10g02193 312 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 49 103 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g02193 Gma-Chr10 49502266 49507519 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Gma10g02193 Myb_DNA-binding 3.8e-10 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g02193 - - gmx:100794389 610.142
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g02193 10 49502266 49507519 Gma10g02193 10 49502266 49507519 ECH
Gma10g02193 10 49502266 49507519 Gma20g01526 20 42283599 42289582 GST
Gma16g01538 16 35741107 35748310 Gma10g02193 10 49502266 49507519 PCT
Gma09g01255 09 34249456 34257360 Gma10g02193 10 49502266 49507519 PCT
Gma10g02193 10 49502266 49507519 Gma16g01538 16 35741107 35748310 PCT
Gma10g02193 10 49502266 49507519 Gma09g01255 09 34249456 34257360 PCT