Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g02184 ATGGAAGACCCCTCAGATTCCccaccaccaccaccaccaccaccaccacAAACACCCCTAAAAACCTACAAACTAAGCGCCACCTCAATCTCCTACACCAAATCCACCACCAAACCCTCATTTACTTCTCTCTTCTTCACCCCATGCACCACCACCCCACCAACCTACATCCTCAAAGACATCTCCCTCACCGCCCTCCCCTCCCAAATCCTGGCCGTGGTGGGCCCCAGCGGCGCCGGAAAATCCACCCTCCTCGACATCCTCGCCGCCCGCACCCTCCCCTCCCACGGCACTCTCCTCCTCAACTCCGCTCCTCTCGTCCCCTCCACCTTCCGCAAACTCTCCTCCTACGTCCCCCAACACGACCACTGCCTCCCTCTCCTCACCGTCTCCGAAACCTTCCTCTTCGCCGCAAAGCTCCTAAAACCCAAAACCTCAAACCTCGCCGCCATCGTCTCCTCCCTCCTCTCCGAACTCCGACTCACGCACCTATCCAACACGCGCCTCGCGCGTGGCCTCTCCGGCGGAGAACGCAGAAGGGTCTCCATTGGCCTCTGTCTCCTCCACGATCCCGCTGTATTACTCCTCGACGAACCTACTTCGGGGCTCGACAGTACTTCGGCCTTCAAAGTCATGCGAATTCTAAAGCAAACGTGCGTCTCTCGCAACAGAACCATTATTCTCTCCATCCACCAACCCAGCTTCAAGATTCTCGCTTGCATTGATAGGATCTTGTTGCTCTCAAAAGGACAAGTTGTTCATCATGGAAGTGTTGCCACGTTGCAAGCGTTCTTGCACTCCAATGGCTTCACTGTCCCTCATCAACTCAACGCGTTGGAATATGCTATGGAGATTTTGAGCCAGTTGAATGAGGCTAAGCCTGTTACTCCACCGAGTATTCCTGAATCGCCTGAGAGATCAAGTTCAGTGATTTCGGTTTCTGATGGTGGAGTTAGGAGTAGTAGAGAGATCATAAGGTATAAAAGCTCTAGGGTTCATGAAATTTTCACTCTCTATAGCAGGTTTTGGAAGATTATCTACAGAACTAGACAACTTCTTTTGACCAACACCGCAGAAGCACTTCTCGTGGGTCTTGTGTTGGGAACTATTTATATCAATATAGGGTTTGATAAGGAAGGGATTGAGAAAAGGTTTGGTCTTTTTGCCTTCACTCTCACGTTTCTATTGTCCTCCACAACGGAAACCCTTCCTATTTTCATCAACGAGAGACCGATCTTGCTGAGAGAAACTTCGAGTGGGGTTTATAGGCTCTCGTCTTATCTCATTGCAAACACGCTTGTTTTCTTGCCCTACTTGTTCGTTGTTGCTGTTATATACTCTATCCCCGTTTATTTTTTAGTGGGTCTCTGTGCTTCGTGGCTTTCTTTTGCTTACTTTGTTTTGGTCATTTGGGTCATTGTTCTGATGGCAAACTCGTTCGTTCTCTTCTTGAGCTCTCTTGCTCCGAACTACATTGCTGGAACTTCGCTTCTAACGGTGCTTCTCGCAGCGTTTTTTCTCTTCTCTGGGTATTTTATCTCCAAGGAAAGCTTGCCAAAGTACTGGCTCTTCATGCATTTTTTCTCTATGTATAAATACGCTCTTGATGCTCTTCTCATCAACGAGTACTCGTGCTTGGTGACAAAGTGTTTGATATGGTACCAAGAGAATGAACAGTGCATGGTGACTGGTGGTGACGTGTTGCAGAAAAAAGGACTCAAAGAGAGTGAAAGGTGGACCAACGTGTACTTCTTGCTCGGGTTCTTTGTGCTGTATCGTGTGCTTTGCTTCTTGGTTTTGGTTAGAAGGGTTTCGAGATCCAAAACTTAA 1830 0.4781 MEDPSDSPPPPPPPPPQTPLKTYKLSATSISYTKSTTKPSFTSLFFTPCTTTPPTYILKDISLTALPSQILAVVGPSGAGKSTLLDILAARTLPSHGTLLLNSAPLVPSTFRKLSSYVPQHDHCLPLLTVSETFLFAAKLLKPKTSNLAAIVSSLLSELRLTHLSNTRLARGLSGGERRRVSIGLCLLHDPAVLLLDEPTSGLDSTSAFKVMRILKQTCVSRNRTIILSIHQPSFKILACIDRILLLSKGQVVHHGSVATLQAFLHSNGFTVPHQLNALEYAMEILSQLNEAKPVTPPSIPESPERSSSVISVSDGGVRSSREIIRYKSSRVHEIFTLYSRFWKIIYRTRQLLLTNTAEALLVGLVLGTIYINIGFDKEGIEKRFGLFAFTLTFLLSSTTETLPIFINERPILLRETSSGVYRLSSYLIANTLVFLPYLFVVAVIYSIPVYFLVGLCASWLSFAYFVLVIWVIVLMANSFVLFLSSLAPNYIAGTSLLTVLLAAFFLFSGYFISKESLPKYWLFMHFFSMYKYALDALLINEYSCLVTKCLIWYQENEQCMVTGGDVLQKKGLKESERWTNVYFLLGFFVLYRVLCFLVLVRRVSRSKT 609
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g02184 609 Pfam ABC-2 type transporter 334 543 IPR013525 GO:0016020|GO:0140359
Gma10g02184 609 PANTHER ABC TRANSPORTER G FAMILY MEMBER 8 8 604 - -
Gma10g02184 609 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 8 604 - -
Gma10g02184 609 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 53 265 IPR027417 -
Gma10g02184 609 Pfam ABC transporter 58 201 IPR003439 GO:0005524
Gma10g02184 609 ProSitePatterns ABC transporters family signature. 173 187 IPR017871 GO:0005524
Gma10g02184 609 SMART AAA_5 67 251 IPR003593 -
Gma10g02184 609 Gene3D - 41 294 IPR027417 -
Gma10g02184 609 Pfam ABC-2 type transporter 231 292 IPR043926 GO:0140359
Gma10g02184 609 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 39 274 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g02184 Gma-Chr10 49436919 49438817 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g02184 51 257 Calmodulin-binding Proteins AT2G36910 31.193 4.28e-18 87.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g02184 K05681 - gmx:100790712 1016.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g02184 10 49436919 49438817 Gma10g02184 10 49436919 49438817 ECH
Gma10g02184 10 49436919 49438817 Gma20g01534 20 42350690 42352602 GST