Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Gma10g02182 | ATGGCGTCAGGGGACACAGATTCCTTCAGCGATAAGGTAGAAGAGAAGTTCCACGACCACAACtccgattccgattcctattccgattccgatGACGACCACAACAACAGGCCGCCGCCCAAGACCACCGTTTCCAACAACGTTTACCGCCTCTTCGGTCGCGATCAGCCCGTCCACAAGGTCCTCGGCGGCGGAAAACCTGCTGATATTTTGCTATGGAGGAACAGGAGAAGCACTGGAGTCGTACTTGGTGCAGGCACTGCCTTCTGGATTTTCTTTGAGTTGATGCAATACcacctcataacttttatttgccatttattgattgtgtctctcgcggcacttttcttgtggtccaatgcatctgtctttatccacaagtcttcactgcacatccctcatgtagcacttcctgaggaatgcgttcatcaggttgcttctgctttaacaattgagattaaccgagccttcgttattgtgcgggaaattggaactgggagagatttaaagaagttccttagcgttattgctgtattatgggttatctcggttattgggagttggttcaacttcatgaccttgttttacctattttttgtgtcactgttcacgttgccactgctGTTCGAGACTTGGCATCGAACACAGCCACCTTCTGTGATCATGAGGTTCGAGACATGGACAAGTTCAAAACCAAAACAACATCAATCTCACAAATGA | 720 | 0.2556 | MASGDTDSFSDKVEEKFHDHNSDSDSYSDSDDDHNNRPPPKTTVSNNVYRLFGRDQPVHKVLGGGKPADILLWRNRRSTGVVLGAGTAFWIFFELMQYHLITFICHLLIVSLAALFLWSNASVFIHKSSLHIPHVALPEECVHQVASALTIEINRAFVIVREIGTGRDLKKFLSVIAVLWVISVIGSWFNFMTLFYLFFVSLFTLPLLFETWHRTQPPSVIMRFETWTSSKPKQHQSHK | 239 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Gma10g02182 | 239 | Pfam | Reticulon | 68 | 212 | IPR003388 | - | |
| Gma10g02182 | 239 | PANTHER | RETICULON | 2 | 212 | IPR045064 | GO:0009617 | |
| Gma10g02182 | 239 | MobiDBLite | consensus disorder prediction | 1 | 46 | - | - | |
| Gma10g02182 | 239 | PANTHER | RETICULON-LIKE PROTEIN | 2 | 212 | - | - | |
| Gma10g02182 | 239 | MobiDBLite | consensus disorder prediction | 8 | 38 | - | - | |
| Gma10g02182 | 239 | ProSiteProfiles | Reticulon domain profile. | 67 | 210 | IPR003388 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Gma10g02182 | Gma-Chr10 | 49406724 | 49412259 | Dispersed/Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Gma10g02182 | - | K20721 | gmx:100790190 | 406.757 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Gma07g00579 | 07 | 5613987 | 5617254 | Gma10g02182 | 10 | 49406724 | 49412259 | ECH | |
| Gma16g00277 | 16 | 2935797 | 2938562 | Gma10g02182 | 10 | 49406724 | 49412259 | ECH | |
| Gma05g02079 | 05 | 42066538 | 42069042 | Gma10g02182 | 10 | 49406724 | 49412259 | ECH | |
| Gma08g00182 | 08 | 1600873 | 1602493 | Gma10g02182 | 10 | 49406724 | 49412259 | ECH | |
| Gma10g02182 | 10 | 49406724 | 49412259 | Gma10g02182 | 10 | 49406724 | 49412259 | ECH | |
| Gma10g02182 | 10 | 49406724 | 49412259 | Gma20g01536 | 20 | 42371501 | 42374277 | GST |