Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g02168 ATGTCGTCCGAGACGATGCGTGATTCCTGGGAGGAGTCTAGGCCAAGGCCGCGGATATCAGAGTGGAAGAGCGTGGCAATGGCTTTCATTCCTGCTGCAACGGAGCTGTTGCCGACCGTTGTCAGTGATGCTGAACTCTCTAAAAAAGATGAGAAGCAGAAGATAGATATTCAACAGAATAGTAATCATATGACCAATCTTGCTATCACCAAGTGCAGTGGCGAGACACAAGCCAATTTGGCTTCAGTTATTACTCAATACGTGGAGACTCTAAATCAGCACAACTTGCGCTTCTTGGgttaccccacTAATCAAGACTTCGACTATGATGCACTAGCACCGTTATTGCATTTTCACCTAAACAATGTTGGTGATCCATTTACAGAGAGTAGCTTTAGTTTAAATTCATCAAAATTTGAAGTTTGCGTGCTTGATTGGTTTGCTAACCTATGGGAGATAGATAAGGGTGAGTATTGGGGATATGTCACAACTGGTGGAACTGAAGGAAATCTTCATGGAATTTTAACAGGGAGGGAACAGTTTCCAGATGGTATTCTATATACTTCACAGGATTCGCATTATTCAATATTTAAAGCAGCAAGAATGTATAGGATGCAATGTGTGACAGTTGGCACTTTGGTCTCTGGTGAGATTGATTGTGTTGATTTAAAGGCTTTACTTCTTGCTCATAAGGACAAGCCAGCCATCATCAATCTGAATATAGGAACAACCATGAAAGGAGCTATTGATGACATTGATCTTGTAGTGCAAACACTTGAAGGAAGTGGCTTTTCGTGTGATCAATTTTACATTCATTGTGATGGAGCTTTATTTGGAATGATGATGCCATTTCTTATACAAGCTCCAAAGGTTACCTTCAAGAAGCCTATTGGAAGTATAACCATTTCTGGCCATAAGTTCCTGGGATGCCCATTTCCTTGTGGTGTTTTAATAACTCGTTTGGAATATATCAACACATTAGCTAAAAATGTTGAATATATTGCTTCAAGGGATGTCACAATCACAGGAAGTCGTAGTGGGCATGCTCCAATTTTTCTCTGGTATGCACTCAAAGAAAGAGGTTCAGTAGGACTCCAAAATGAAGTACAAAAATGCATAATTAGTGCACGTTATTTACAACATCGACTTCGTGAAGCCAAAATTGGTGCAATGTTAAATGAGTTTAGCAACACTGTCGTCTTTGAGAGGCCTCAAGATGATGACTTCGCTCGTAAGTGGAGCTTAGCATGCAAAAAAAATATTGCACATGGGGTGGTGATGCAACATGTTACTGTTGAGATGTTGGACTCCTTCGTTAATGAATTTATTCAGGAACGACAAATTTGGTTTCAAGATGATGGTAAGAGAAATCCCCTATGCCTTGCAAACGACATTGGTGTTGGAAATTGTGCTTGCATATTGCACGAATGA 1431 0.3997 MSSETMRDSWEESRPRPRISEWKSVAMAFIPAATELLPTVVSDAELSKKDEKQKIDIQQNSNHMTNLAITKCSGETQANLASVITQYVETLNQHNLRFLGYPTNQDFDYDALAPLLHFHLNNVGDPFTESSFSLNSSKFEVCVLDWFANLWEIDKGEYWGYVTTGGTEGNLHGILTGREQFPDGILYTSQDSHYSIFKAARMYRMQCVTVGTLVSGEIDCVDLKALLLAHKDKPAIINLNIGTTMKGAIDDIDLVVQTLEGSGFSCDQFYIHCDGALFGMMMPFLIQAPKVTFKKPIGSITISGHKFLGCPFPCGVLITRLEYINTLAKNVEYIASRDVTITGSRSGHAPIFLWYALKERGSVGLQNEVQKCIISARYLQHRLREAKIGAMLNEFSNTVVFERPQDDDFARKWSLACKKNIAHGVVMQHVTVEMLDSFVNEFIQERQIWFQDDGKRNPLCLANDIGVGNCACILHE 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g02168 476 SUPERFAMILY PLP-dependent transferases 91 444 IPR015424 -
Gma10g02168 476 Gene3D - 116 357 IPR015421 GO:0003824
Gma10g02168 476 ProSitePatterns DDC / GAD / HDC / TyrDC pyridoxal-phosphate attachment site. 299 320 IPR021115 GO:0016831
Gma10g02168 476 PANTHER SERINE DECARBOXYLASE 42 475 - -
Gma10g02168 476 Gene3D Aspartate Aminotransferase, domain 1 358 446 IPR015422 GO:0003824
Gma10g02168 476 Pfam Pyridoxal-dependent decarboxylase conserved domain 136 395 IPR002129 GO:0016830|GO:0019752|GO:0030170
Gma10g02168 476 PANTHER - 42 475 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g02168 Gma-Chr10 49232145 49236969 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g02168 241 373 Calmodulin-binding Proteins AT1G65960 27.465 3.31e-06 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g02168 K25193 - gmx:100784867 909.057
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g02168 10 49232145 49236969 Gma10g02168 10 49232145 49236969 ECH